DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8072 and R3hdml

DIOPT Version :9

Sequence 1:NP_648384.1 Gene:CG8072 / 39181 FlyBaseID:FBgn0036070 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_001092801.1 Gene:R3hdml / 100043899 MGIID:3650937 Length:253 Species:Mus musculus


Alignment Length:200 Identity:45/200 - (22%)
Similarity:68/200 - (34%) Gaps:47/200 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LLGLHNGYRQEVASNLFVDLPPAQKMPELVWDNYLSVVAEYHLKRCQMDLPDDSCVATDDFSEPH 128
            ||..||..|..|.       |||..|..:|||..|:..||....:         |:.|...|:..
Mouse    66 LLDYHNHIRASVH-------PPAANMEYMVWDEQLARSAEAWATQ---------CIWTHGPSQLM 114

  Fly   129 FNYAEDFYPRPVIRQSNVREMTILAEQWLDEL--------YDLDDIATYSAEGEI----RNIIND 181
            ....::.    .|.....|.:..|...|.:|.        .|......:...|.:    ..::..
Mouse   115 KYVGQNL----SIHSGRFRSVVDLVRSWSEEKRHYSFPAPKDCTPHCPWLCSGPVCSHYTQMVWA 175

  Fly   182 RSSYMGCAAGQDYDL------WNIHFVLVCYYSSGPPVEGNLYEEGIFNA----TLC-PNGQSDE 235
            .||.:|||......:      |.....|||.|:    ::||...|..:.|    :.| |:.|.:.
Mouse   176 SSSRLGCAINTCSSINVWGNTWQQAVYLVCNYA----IKGNWIGEAPYKAGKPCSACPPSYQGNC 236

  Fly   236 YPNLC 240
            ..|:|
Mouse   237 NSNMC 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8072NP_648384.1 SCP_euk 61..208 CDD:240180 35/161 (22%)
R3hdmlNP_001092801.1 CAP_R3HDML 63..208 CDD:349409 35/161 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841249
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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