DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr10 and paplna

DIOPT Version :9

Sequence 1:NP_729591.1 Gene:dpr10 / 39180 FlyBaseID:FBgn0052057 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_005169942.1 Gene:paplna / 562930 ZFINID:ZDB-GENE-070815-4 Length:1187 Species:Danio rerio


Alignment Length:332 Identity:60/332 - (18%)
Similarity:104/332 - (31%) Gaps:109/332 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SVSNNNHNNAEAKPTHAPPSHYPH-GHKWNEPYFDLTMPRNITSLVGKSAYLGCR---VKHLGNK 83
            |||.::.|||......:..|:... ..::|..|..|...|     .|::|.|.|.   |..:...
Zfish   919 SVSGSSQNNAGISEVDSSQSYTSQSSSRFNIDYSPLVEAR-----AGQTAKLQCSVLPVSAIHAV 978

  Fly    84 TVAWIRHRDLHILTVGTYTYTTDQRFQTSYHRDIDEWTLQIKWAQQRDAGVYECQIS-TQPVRSY 147
            |:.|.|               ..|...:..|....:.||.||.....|:|:|.|.:: .|.....
Zfish   979 TIHWSR---------------AGQPLNSLRHSQHSDGTLVIKQLTADDSGLYTCTVTDAQKFEER 1028

  Fly   148 SVNLNIVDLIDAETSDIMQQYYNDDAFYIAENRVYQSSNDEFAGMFGPIQTVAVPTATILGGPDL 212
            .|.|.::                                       |.::....|.       |:
Zfish  1029 QVQLRVL---------------------------------------GDLRITKAPI-------DV 1047

  Fly   213 YVDKGSTINLTCIIKFSPEPPTHIFWYHQDKVLSEETSGGRLKFKTIKSEETKSILLIYDADLLH 277
            .|.:|||..|.|::   .....::.|....  :.....|.|:.   :.::.|   |::.:...:.
Zfish  1048 DVVQGSTAQLACVV---TGENVNVGWSRNG--VPVRPDGHRVH---VSADGT---LILNNVQSVD 1101

  Fly   278 SGKYSC--YPSNTEI---ASIRV-----HVLQG---------ERPEAMQTN--------AAPAAV 315
            .|.|:|  |.....:   |.||:     ..:.|         ::||.....        ::|...
Zfish  1102 EGTYTCNAYTGTLSVSAAAEIRLAKTPQQDIDGGQFSSSDCVDQPELANCKLIVYARLCSSPYYS 1166

  Fly   316 ALACWSC 322
            :..|.||
Zfish  1167 SFCCSSC 1173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr10NP_729591.1 Ig 63..143 CDD:299845 18/83 (22%)
IG_like 210..297 CDD:214653 19/96 (20%)
IGc2 217..287 CDD:197706 14/71 (20%)
paplnaXP_005169942.1 TSP1 24..75 CDD:214559
ADAM_spacer1 181..293 CDD:310520
TSP1 303..356 CDD:214559
TSP1 388..442 CDD:214559
TSP1 449..498 CDD:214559
TSP1 504..557 CDD:214559
KU 720..771 CDD:238057
Ig_3 839..906 CDD:316449
IGc2 960..1022 CDD:197706 18/76 (24%)
I-set 1039..1121 CDD:333254 17/99 (17%)
PLAC 1142..1173 CDD:312271 4/30 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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