DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Srg2 and SIT1

DIOPT Version :10

Sequence 1:NP_729590.1 Gene:Srg2 / 39179 FlyBaseID:FBgn0262007 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_010849.3 Gene:SIT1 / 856644 SGDID:S000000791 Length:628 Species:Saccharomyces cerevisiae


Alignment Length:263 Identity:48/263 - (18%)
Similarity:88/263 - (33%) Gaps:85/263 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 AMSISSFVIITY---------VVAILVSNDLRNASSWYIGLAFCRWLGSLIPSFCMESLGRKKPA 387
            |:.|:.|:...:         |:.:.|...:::|:......:|...:...|..|.:..:.|.||.
Yeast   358 ALLIAFFINFNWYMQGDYMYTVLVVAVHESIKSATRITSLYSFVSVIVGTILGFILIKVRRTKPF 422

  Fly   388 V----------FGLLVS---------------CGLSFAVGSQYNVYTYMSQ-------------- 413
            :          |||||.               |.|.|..||    :||::|              
Yeast   423 IIFGISCWIVSFGLLVHYRGDSGAHSGIIGSLCLLGFGAGS----FTYVTQASIQASAKTHARMA 483

  Fly   414 VTVLIMIFEFFAGMAFSS--NSAYLTEAYPMGVKQHFIGLTFITEIFVFLIINVCDFNFGQG--- 473
            |...:.:..:..|.||.|  :.|..|...|..:.:.....|...:.:......:..:.:|..   
Yeast   484 VVTSLYLATYNIGSAFGSSVSGAVWTNILPKEISKRISDPTLAAQAYGSPFTFITTYTWGTPERI 548

  Fly   474 ---YNYFYIMGAMYLAGVI-----LGVLTLPETRRMT----LQG--------------AQEQF-- 510
               .:|.|:...:.:.|::     ||...:....::|    |:|              .:|.|  
Yeast   549 ALVMSYRYVQKILCIIGLVFCFPLLGCAFMLRNHKLTDSIALEGNDHLESKNTFEIEEKEESFLK 613

  Fly   511 NKF 513
            |||
Yeast   614 NKF 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Srg2NP_729590.1 DUF2076 <6..>42 CDD:430876
MFS 115..504 CDD:475125 41/236 (17%)
SIT1NP_010849.3 MFS_ARN_like 70..582 CDD:340880 40/227 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.