DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Srg2 and Slc2a8

DIOPT Version :10

Sequence 1:NP_729590.1 Gene:Srg2 / 39179 FlyBaseID:FBgn0262007 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_062361.1 Gene:Slc2a8 / 56017 MGIID:1860103 Length:477 Species:Mus musculus


Alignment Length:522 Identity:114/522 - (21%)
Similarity:201/522 - (38%) Gaps:111/522 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 MPPRDPHTR---VDPPGGCFQRNQKNKPQSNAVGAAGLIFISGGMNIAWAIGFQGPIYYQTTK-- 111
            |.|.||...   :.||       :...|:...|..|......|.::..:|:|:..|......:  
Mouse     1 MSPEDPQETQPLLRPP-------EARTPRGRRVFLASFAAALGPLSFGFALGYSSPAIPSLRRTA 58

  Fly   112 -------HNYIAWF-----IGAIIGALVTMALTNKVAKKYILQFSSVLVTVGGLVIACTHNNGAG 164
                   .|..:||     :||..|.::...|.::..:|..|...:|....|..||         
Mouse    59 PPALRLGDNAASWFGAVVTLGAAAGGILGGWLLDRAGRKLSLLLCTVPFVTGFAVI--------- 114

  Fly   165 TTAA---------CYLDGIANGLVFAPFMALVGEISVPYLRGKASATLEQLCFGTGILLQILYVS 220
             |||         ..|.|:|.|:........:.||:.|.:||...:.: ||...|||||  .||:
Mouse   115 -TAARDVWMLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCV-QLMVVTGILL--AYVA 175

  Fly   221 NWTYSSYMTYNDFTSENMKGVLSTIYGVLALIMGSFFTIESPVLMLANNEEQAAIDALRRLQKPA 285
            .|.          .......||..:...|.|::..:.. |:|..:|..::.|.|:.|||.|..  
Mouse   176 GWV----------LEWRWLAVLGCVPPTLMLLLMCYMP-ETPRFLLTQHQYQEAMAALRFLWG-- 227

  Fly   286 VLTEETYE---LLAEHKRY---LAYNKNMSKSESISKALPTFMRLAYLRALNAMSISSFVIITYV 344
              :||.:|   :.|||:.:   |.....:.|...|..:|..|.:|:.:.|          |:.|.
Mouse   228 --SEEGWEEPPVGAEHQGFQLALLRRPGIYKPLIIGISLMVFQQLSGVNA----------IMFYA 280

  Fly   345 VAILVSNDLRNASSWYIGLAFCRWLGSLIPSFCMESLGRK-KPAVFGLLVSCGLSFAVGSQYNVY 408
            .:|......:::|...:.:...:.|.:.:.:..|:..||: ..|:.|:::...:| |.|:.:.:.
Mouse   281 NSIFEEAKFKDSSLASVTVGIIQVLFTAVAALIMDRAGRRLLLALSGVIMVFSMS-AFGTYFKLT 344

  Fly   409 TYM----SQVTVLIMIFE------------------FFAGMAFSSNS---AYLTEAYPMGVKQHF 448
            ..:    |.|.::.:..|                  |.||.|.....   ..::|.:|:.||...
Mouse   345 QSLPSNSSHVGLVPIAAEPVDVQVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVA 409

  Fly   449 IGLTFITEIFV-FLIINVCDFN----FGQGYNYFYIMGAMYLAGVILGVLTLPETRRMTLQGAQE 508
            .|:..:|..|: ||:..  :|:    ..:.|..|::..|.....|:..:..:|||:..||:....
Mouse   410 TGICVLTNWFMAFLVTK--EFSSVMEMLRPYGAFWLTAAFCALSVLFTLTVVPETKGRTLEQVTA 472

  Fly   509 QF 510
            .|
Mouse   473 HF 474

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Srg2NP_729590.1 DUF2076 <6..>42 CDD:430876
MFS 115..504 CDD:475125 98/439 (22%)