DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32053 and SIT1

DIOPT Version :9

Sequence 1:NP_729587.1 Gene:CG32053 / 39178 FlyBaseID:FBgn0052053 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_010849.3 Gene:SIT1 / 856644 SGDID:S000000791 Length:628 Species:Saccharomyces cerevisiae


Alignment Length:628 Identity:109/628 - (17%)
Similarity:194/628 - (30%) Gaps:271/628 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQTERPSP------DDGFHVVPIHSDAEQHIHRNSDRQRELILQNSQTSPCCNRDLRNQPQANAV 59
            :.|..|:|      |.|.|.:.|::                             ::.|:|    :
Yeast    37 LTTSSPAPSYIELIDPGVHNIEIYA-----------------------------EMYNRP----I 68

  Fly    60 GAAALIF----------LTGGVHIAWSIGFDSSLSE---LEVTNHVQ-ICWFIGAIIGALLGGFF 110
            ...||.|          |.|.:...:.....||.|:   |...|.:: :...:|.|..|.|...|
Yeast    69 YRVALFFSLFLIAYAYGLDGNIRYTFQAYATSSYSQHSLLSTVNCIKTVIAAVGQIFFARLSDIF 133

  Fly   111 SRWFPYKTLMEFCSLITITGGIVMAVNRMDLDALLAGR--YMNGLANGLAIAPTLAMAGE----- 168
            .|:    ::| ..|:|..:.|.::....:::.....|.  |..||...:.|...:|....     
Yeast   134 GRF----SIM-IVSIIFYSMGTIIESQAVNITRFAVGGCFYQLGLTGIILILEVIASDFSNLNWR 193

  Fly   169 -LSVF----------YKRGTTTSAAE-QWPTTIGIFVQI---------VC---------SHSWD- 202
             |::|          :..|..|||.: .|...||::..|         :|         .|:.| 
Yeast   194 LLALFIPALPFIINTWISGNVTSAIDANWKWGIGMWAFILPLACIPLGICMLHMRYLARKHAKDR 258

  Fly   203 ---------------------------------------VQSDFT-----EEQFQG---VLSGVL 220
                                                   |...||     :|:::.   ::..|:
Yeast   259 LKPEFEALNKLKWKSFCIDIAFWKLDIIGMLLITVFFGCVLVPFTLAGGLKEEWKTAHIIVPEVI 323

  Fly   221 GSIALLLAFLL-SIE------SPVDLLEQGNEQGAVQALSRLQRPRAVTAETYDQVRDHRTYVEH 278
            |.:.:|..::| .|:      :|.||::   ::|...||                      .:..
Yeast   324 GWVVVLPLYMLWEIKYSRHPLTPWDLIQ---DRGIFFAL----------------------LIAF 363

  Fly   279 HRSMGW---------------RHALPALVRLSVLRALYALSLSVMVAFTLAWTSTEVYGDSSGPY 328
            ..:..|               ..::.:..|::   :||:. :||:|...|.:...:|  ..:.|:
Yeast   364 FINFNWYMQGDYMYTVLVVAVHESIKSATRIT---SLYSF-VSVIVGTILGFILIKV--RRTKPF 422

  Fly   329 VLFGFLRLMGSFTTSFAL------DSLGRKIPLLLGLVISGCLACGLASRF-----------AGS 376
            ::||    :..:..||.|      ||....     |::.|.||....|..|           |.:
Yeast   423 IIFG----ISCWIVSFGLLVHYRGDSGAHS-----GIIGSLCLLGFGAGSFTYVTQASIQASAKT 478

  Fly   377 HPLTFSGNRMAL---WLLLIYQLFAGIAFAPS------SSYLSEAFPRRIKRPCIAITYILEIIV 432
            |.      |||:   ..|..|.:  |.||..|      ::.|.:...:||..|.:|.        
Yeast   479 HA------RMAVVTSLYLATYNI--GSAFGSSVSGAVWTNILPKEISKRISDPTLAA-------- 527

  Fly   433 QLLLRQMDFAAIGSDSSYVALYFFILGGLLLAGFLFSVWYMPE 475
                     .|.||..:::..|               .|..||
Yeast   528 ---------QAYGSPFTFITTY---------------TWGTPE 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32053NP_729587.1 MFS 73..428 CDD:119392 88/491 (18%)
SIT1NP_010849.3 MFS_ARN_like 70..582 CDD:340880 100/562 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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