DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32053 and ITR2

DIOPT Version :9

Sequence 1:NP_729587.1 Gene:CG32053 / 39178 FlyBaseID:FBgn0052053 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_014538.2 Gene:ITR2 / 854050 SGDID:S000005463 Length:609 Species:Saccharomyces cerevisiae


Alignment Length:558 Identity:103/558 - (18%)
Similarity:184/558 - (32%) Gaps:152/558 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DDGFHVV-PIHSDAEQHIHRNSDRQRELILQNSQTSPCCNRDLRNQPQANAVGAAALIFLT---- 68
            |||..|: |::.:.:..:         :|..|...||                  .:|.||    
Yeast    80 DDGRIVIKPVNDEDDTSV---------IITFNQSISP------------------FIITLTFVAS 117

  Fly    69 -GGVHIAWSIGFDSS---------------LSELEVTNHVQICWFIGAIIGALLGGFFSRWFPYK 117
             .|....:..|:.||               ..|.|:   :.....:||:|.::..|..:..|..:
Yeast   118 ISGFMFGYDTGYISSALISINRDLDNKVLTYGEKEL---ITAATSLGALITSVGAGTAADVFGRR 179

  Fly   118 TLMEFCSLITITGGIVMAVNRMDLDALLAGRYMNGLANGLAIAPTLAMAGELSVFYKRGTTTSAA 182
            ..:.|.:|:.:.|.| :.:.......:.|||.:.|...|:....:.....|::....||..|...
Yeast   180 PCLMFSNLMFLIGAI-LQITAHKFWQMAAGRLIMGFGVGIGSLISPLFISEIAPKMIRGRLTVIN 243

  Fly   183 EQWPTTIGIFVQIVC-------SHSWDVQSDFTEEQFQGVLSGVLGSIALLLAFLLSI---ESPV 237
            ..| .|.|..:...|       .:.|            .:|.| |..|..:|.|....   ::|.
Yeast   244 SLW-LTGGQLIAYGCGAGLNHVKNGW------------RILVG-LSLIPTVLQFSFFCFLPDTPR 294

  Fly   238 DLLEQGNEQGAVQALSRLQRPRAVTAETYDQVRDHRTYVEHHRSMG------------WR----- 285
            ..:.:|:.:.|...|.|..      ..|.|::.|.:  ||...|:.            |.     
Yeast   295 YYVMKGDLKRAKMVLKRSY------VNTEDEIIDQK--VEELSSLNQSIPGKNPITKFWNMVKEL 351

  Fly   286 HALPALVRLSVLRALYALSLSVMVAFTLAWTS----------TEVYGDSSGPYVLFGFLRLMGSF 340
            |.:|:..|..::    ...|..:..|| .|.|          |..:.:||...::......:.:.
Yeast   352 HTVPSNFRALII----GCGLQAIQQFT-GWNSLMYFSGTIFETVGFKNSSAVSIIVSGTNFVFTL 411

  Fly   341 TTSFALDSLGRKIPLLLGL--VISGCLACGLASRFAGSHPLTFSG-------NRMALW------L 390
            ...|.:|.:||:..||:||  :....:.|.:|..|.|   :.|:|       :..:.|      .
Yeast   412 IAFFCIDKIGRRYILLIGLPGMTVALVICAIAFHFLG---IKFNGADAVVASDGFSSWGIVIIVF 473

  Fly   391 LLIYQLFAGIAFAPSSSYLSEAFPRRIKRPCIAITYI--------LEIIVQLLLRQMDFAAIGSD 447
            :::|..|..:.........||.||:.::.  :..:|.        |.|....|....:....|: 
Yeast   474 IIVYAAFYALGIGTVPWQQSELFPQNVRG--VGTSYATATNWAGSLVIASTFLTMLQNITPTGT- 535

  Fly   448 SSYVALYFFILGGLLLAGFLFSVWYMPETKDTTLLQAQ 485
                   |....|:.....:|..:..||.....|.:.|
Yeast   536 -------FSFFAGVACLSTIFCYFCYPELSGLELEEVQ 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32053NP_729587.1 MFS 73..428 CDD:119392 79/429 (18%)
ITR2NP_014538.2 MFS_HMIT_like 115..556 CDD:340918 87/484 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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