DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32053 and hmit-1.3

DIOPT Version :9

Sequence 1:NP_729587.1 Gene:CG32053 / 39178 FlyBaseID:FBgn0052053 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:511 Identity:94/511 - (18%)
Similarity:174/511 - (34%) Gaps:142/511 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 AIIGALLGGFFSRWFPYKTLMEFCSLITITGGIVMAVNRMDLDALLAGRYMNGLANGLAIAPTLA 164
            |.||:|..|..|.:...|.::...| :|.|.|.::.........||.||.:.|||.|.|......
 Worm    81 AAIGSLCSGPGSDFLGRKKIIIGAS-VTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPI 144

  Fly   165 MAGELSVFYKRGTTTSAAEQWPTTIGIFVQIVCSHSWD-VQSDFTEEQFQGVLSGVLGSIALLLA 228
            ...|.|..:.||...:.. |...|:|:.:..:...::. |..|....:.....:.| .:|...:.
 Worm   145 YVSEASPSHIRGKLVTGF-QLMITVGLVIANIIGGAFSYVDPDQVGWRLMFAFAAV-PAIIQFVC 207

  Fly   229 FLLSIESPVDLLEQGNEQGAVQALSRLQRPRA------VTAETYDQVRDHRTYVEHH-------R 280
            ||...|||..|.|.|....|.:.|:|:.....      :...::....:.|...||.       |
 Worm   208 FLFLPESPRWLYEHGRTVEAREVLTRIYNGHTEWVDYEINEISFSYEEELRAKAEHAGNGPTIIR 272

  Fly   281 SMGWRHALPALVRLSVLRALYALS-LSVMVAF--------------TLAWTSTEVYGDSSGPYVL 330
            .:...|...|::..|:|:....|| ::.::.:              |..|.|.   |.|:     
 Worm   273 ILKTPHVRKAMIIGSLLQMFQQLSGINTVMYYTGNIIRSAGVKDNHTTIWISV---GTSA----- 329

  Fly   331 FGFLRLMGSFTTSFALDSLGRKIPLLLGLV----------------------------------- 360
               :..:|:|.....::.:||::.||:.::                                   
 Worm   330 ---INFLGTFIPIALVERVGRRVLLLVSMIGVILFLIAMGVSFLLINNDSLRTFDQQNYTLNYNP 391

  Fly   361 ----ISGCLA------------CGL------------------ASRFAGSHPLTFSG-------- 383
                .:.||.            ||.                  :|.::.:....||.        
 Worm   392 SVKHAAKCLKYSNCDFCVTDENCGFCESKVAKKGYCLPFPSDDSSDYSATGICEFSNLTNNGTDF 456

  Fly   384 -----------NRMALWLLLIYQLFAGIAFAPSSSYL-SEAFPRRIKRPCIAIT----YILEIIV 432
                       ..:.:.:::.|.|.....:||....| :|.:|...:...::::    :|..:||
 Worm   457 EWEDTYCHTKFTVLPIIIMVFYLLSFSAGYAPLPWVLNAEFYPLWARSTAVSVSTACNWIFNLIV 521

  Fly   433 QLLLRQMDFAAIGSDSSYVALYFFILGGLLLAGFLFSVWYMPETKDTTLLQAQFKF 488
            .|....:..||    :.|..  |||..|..:...:|..:::||||..::.:.:..|
 Worm   522 SLTFLSLSQAA----TKYGT--FFIYCGCTMVALVFVFFFVPETKGYSIDEVEMLF 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32053NP_729587.1 MFS 73..428 CDD:119392 77/449 (17%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:421695 89/496 (18%)
MFS <190..>249 CDD:421695 13/59 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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