DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnc and Naa20A

DIOPT Version :10

Sequence 1:NP_648378.1 Gene:vnc / 39175 FlyBaseID:FBgn0263251 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001259714.1 Gene:Naa20A / 32962 FlyBaseID:FBgn0031043 Length:180 Species:Drosophila melanogaster


Alignment Length:178 Identity:61/178 - (34%)
Similarity:93/178 - (52%) Gaps:9/178 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EDLMTMQHCNLLCLPENYQMKYYFYHGLTWPQLSYVAVDDKGAIVGYVLAKMEEPEPNEESRHGH 73
            :||....:.|...|.|.|.:.:|..:...||:...:|....|.|:||::.|:   |.:.::.|||
  Fly    10 DDLFKFNNVNFDPLTETYGLSFYTQYLAKWPEYFQLAESPSGQIMGYIMGKV---EGHLDNWHGH 71

  Fly    74 ITSLAVKRSYRRLGLAQKLMNQASQAMVECFNAQYVSLHVRKSNRAALNLYTNALKFKIIEVEPK 138
            :|:|.|...|||||||..||: ..:.:.|...|.:|.|.|||||:.|:|:||| |.:.|.....:
  Fly    72 VTALTVSPDYRRLGLAALLMS-FLEDISEKKRAYFVDLFVRKSNQVAINMYTN-LGYIIYRTILE 134

  Fly   139 YYA--DGEDAYAMRRDLSEFADEDQAKAAKQSGEEEEKAVHRSGGHGH 184
            ||:  ..||||.||:.||.  |.::......:.....:.:.|...|.|
  Fly   135 YYSGDQDEDAYDMRKALSR--DVNKKSVIPYTQPITMRELRRQMRHDH 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vncNP_648378.1 RimI 54..154 CDD:440224 43/101 (43%)
Naa20ANP_001259714.1 RimI 55..152 CDD:440224 43/101 (43%)

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