DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dronc and casp23

DIOPT Version :9

Sequence 1:NP_524017.1 Gene:Dronc / 39173 FlyBaseID:FBgn0026404 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001103182.1 Gene:casp23 / 563034 ZFINID:ZDB-GENE-071004-27 Length:446 Species:Danio rerio


Alignment Length:467 Identity:96/467 - (20%)
Similarity:162/467 - (34%) Gaps:146/467 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IGMPKRHREHIRKNLNIL-----------------VEWTNYERLAMECVQQGILTVQMLRNTQDL 55
            |.:..:.||.:.:||..:                 ||..|...|.::|.   |.|.         
Zfish    97 IPLSDKQREFLEENLAAIVARRLFDFKSCPGCQSHVERRNRNNLCVKCT---ICTA--------- 149

  Fly    56 NGKPFNMDEKDVRVEQHRRLLLKITQRGPTAYNLLINALRNINCLDAAVLLESVDESDSRPPFIS 120
                 ||.:......:.||....:|              .|..|.......:||.|.|...|.  
Zfish   150 -----NMTQTYYFCWKCRREWKGVT--------------NNAECCGNTGCGQSVTEPDPLKPC-- 193

  Fly   121 LNERRTSRKSADIVDTPSPEASEGPCVSKLRNEPLGALTPYVGVVDGPEVKKSKKIHGGDSAILG 185
                 ||...|:.:.|      ||.|:..::::             .|:.|:             
Zfish   194 -----TSEFKAEKLMT------EGKCIYPVKDK-------------SPQRKR------------- 221

  Fly   186 TYKMQSRFNRGVLLMVNIMDYPDQNRRRIGAEKDSKSLIHLFQELNFTIFPYGNVN-QDQFFKLL 249
                       :.|::|.:|:.|  ..|.||:||..|:..|.:.|.:::....::: |.....:.
Zfish   222 -----------LALLINNVDFKD--NVRTGADKDELSMERLLKGLGYSVVTLRDLSAQGMSTAMR 273

  Fly   250 TMVTSSSYVQNTECFVMVLMTHGNSVEGKEKVEFCDGSVVDMQKIKDHF---------QTAKCPY 305
            .......:..:..||| |||:||      ::...|  .:.|.....|.|         .|..|..
Zfish   274 DFSQRKEHADSDSCFV-VLMSHG------DESGIC--GIFDSSSQDDVFPPDEIFKCLNTPNCAG 329

  Fly   306 LVNKPKVLMFPFCRGDEYDLGHPKNQGNLMEPVYTAQEEKWPDTQTEGIPSPSTNVPSLADTLVC 370
            |.:|||:::...|||     |.|   ||:..|              :.:|...|..........|
Zfish   330 LRDKPKIILIQSCRG-----GKP---GNVDVP--------------DSVPIRGTRREHKEKDFCC 372

  Fly   371 Y-ANTPGYVTHRDLDTGSWYIQKFCQVMADHAHDTDLEDILKKTSEAVGNKRTKKGSMQTGAYDN 434
            : ::||..|::|:.:.||.:||...::...||::.|:|::.:|    |..|..:....|....:.
Zfish   373 FRSSTPDTVSYRNKEKGSHFIQDLVEIFNRHAYEDDIEELFRK----VIMKFRETHDEQMPCKER 433

  Fly   435 LGFNKKLYFNPG 446
            ....||.|..||
Zfish   434 TTLCKKFYLFPG 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DroncNP_524017.1 CARD 18..106 CDD:260018 16/104 (15%)
CASc 186..443 CDD:237997 60/267 (22%)
casp23NP_001103182.1 CASc 210..444 CDD:320727 63/307 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587234
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.700

Return to query results.
Submit another query.