DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dronc and csp-3

DIOPT Version :10

Sequence 1:NP_524017.1 Gene:Dronc / 39173 FlyBaseID:FBgn0026404 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_493011.2 Gene:csp-3 / 190006 WormBaseID:WBGene00000821 Length:139 Species:Caenorhabditis elegans


Alignment Length:54 Identity:16/54 - (29%)
Similarity:21/54 - (38%) Gaps:3/54 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GISIGSLDVDNAETTTTITKAHELTRDEVDTKRSKSQSNDAHIYRGRKRKEPSP 56
            |:.:.:|...|...:....|.|....|  ||.:.....|...||| |....|||
 Worm    39 GLFLSALPKGNVPPSGPSDKGHTSPPD--DTDQRMVPENSPEIYR-RLESVPSP 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DroncNP_524017.1 CARD 18..106 CDD:260018 13/39 (33%)
CASc 186..443 CDD:237997
csp-3NP_493011.2 CASc <11..132 CDD:444667 16/54 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.