DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dronc and csp-2

DIOPT Version :9

Sequence 1:NP_524017.1 Gene:Dronc / 39173 FlyBaseID:FBgn0026404 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001370851.1 Gene:csp-2 / 177391 WormBaseID:WBGene00000820 Length:826 Species:Caenorhabditis elegans


Alignment Length:367 Identity:95/367 - (25%)
Similarity:154/367 - (41%) Gaps:87/367 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 ESVD---ESDS-------RPPFISLNERRTSRKSADIV-----------DTPSPE-------ASE 143
            ||.|   ||||       .||..|..:...:..|:.:.           |.|:|:       |..
 Worm   466 ESTDDAVESDSDDVPAPQSPPTPSPADPGPTTSSSSLTQDPASNATGFSDVPAPQAPPTPSPADP 530

  Fly   144 GPCV--SKLRNEPLGALTPYVG----------------VVDGPEVKKSKKIHGGDSAILGTYKMQ 190
            ||..  |.|..:|....|.:.|                ..||.::.:::|           |: .
 Worm   531 GPTTSSSSLTQDPASNATGFSGSSPPNSFEETRMMCEDASDGKKIDETRK-----------YR-N 583

  Fly   191 SRFNRGVLLMVNIMDYPDQNRRRIGAEKDSKSLIHLFQELNFTIFPYGNVNQDQFFKLLTMVTSS 255
            :|.::...:::|.:.:... .:|||::||.|.|..||:.|.:....|.|:...:..:.:...|.|
 Worm   584 NRSSKCRAIIINNVVFCGM-EKRIGSDKDKKKLSKLFERLGYQSTSYDNLKSSEILETVRQFTQS 647

  Fly   256 SYVQNTECFVMVLMTHGNS--VEGKEKVEFCDGSVVDMQKIKDHFQTAKCPYLVNKPKVLMFPFC 318
            ::   .:..::.:|:||:.  :.|      .||..|.|..|.|...||.   |..|||.||...|
 Worm   648 NH---GDSLIITIMSHGDQGLLYG------VDGVPVQMLDIIDLMCTAS---LAKKPKWLMCVCC 700

  Fly   319 RGDEYDL-----GHPKNQGNLMEPVYTAQEEKWPDTQTEGIPSPSTNVPSLADTLVCYANTPGYV 378
            |||..|.     |...|..:.....:...:.|:|..||..         |.||.||.::.:||::
 Worm   701 RGDRIDRAVRCDGFIDNFFDRFPKFFQFMKSKFPSHQTSS---------SQADLLVSFSTSPGFL 756

  Fly   379 THRDLDTGSWYIQKFCQVMADHAHDTDLEDILKKTSEAVGNK 420
            :.||...|:||||:..:|:.::|.||.|.|:|.:|:..|..|
 Worm   757 SFRDETKGTWYIQELYRVIIENAKDTHLADLLMETNRRVVEK 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DroncNP_524017.1 CARD 18..106 CDD:260018
CASc 186..443 CDD:237997 70/242 (29%)
csp-2NP_001370851.1 pneumo_PspA 239..>533 CDD:411490 16/66 (24%)
PHA03418 <475..>563 CDD:177646 17/87 (20%)
CASc 581..824 CDD:237997 70/241 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162605
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10454
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

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