DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dronc and Casp4

DIOPT Version :10

Sequence 1:NP_524017.1 Gene:Dronc / 39173 FlyBaseID:FBgn0026404 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_446188.2 Gene:Casp4 / 114555 RGDID:621757 Length:373 Species:Rattus norvegicus


Alignment Length:260 Identity:59/260 - (22%)
Similarity:94/260 - (36%) Gaps:61/260 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 RIGAEKDSKSLIHLFQELNFTIFPYGNVNQDQFFKLLTMVTSSSYVQNTECFVMVLMTHGNSVEG 277
            |.||..|...:..|.:||.:.:.....:..:.....:....:.|..|.::...:|||:|| :::|
  Rat   148 RYGANIDISGMKGLLEELGYDVVVKEELTAEGMESEMKDFAALSEHQTSDSTFLVLMSHG-TLQG 211

  Fly   278 KEKVEFC-------DGSVVDMQKIKDHFQTAKCPYLVNKPKVLMFPFCRGDE------------- 322
                 .|       ...|:....|...|....||.|.:||||::...|||..             
  Rat   212 -----LCGTMHSEATPDVLLYDTIYQIFNNCHCPGLRDKPKVIIVQACRGGNPGEVWIRESSGAH 271

  Fly   323 ----YDLGHPKNQGNLMEPVYTAQEEKWPDTQTEGIPSPSTNVPSLADTLVCYANTPGYVTHRDL 383
                .||  |:|..  .:.|..:..||                    |.:..|:.||.::::||.
  Rat   272 SYRAVDL--PRNME--ADAVRMSHVEK--------------------DFIALYSTTPHHLSYRDK 312

  Fly   384 DTGSWYIQKFCQVMADHAHDTDLEDILKKTSEAVGNKRTKKGSM--QTGAYDNLGFNKKLYFNPG 446
            ..||::|.|.......||....|.||..|..::.     :|.|:  |....|.....:..|..||
  Rat   313 TRGSYFISKLISCFRIHACSCHLFDIFLKVQQSF-----EKASINSQMPTIDRATLTRYFYLFPG 372

  Fly   447  446
              Rat   373  372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DroncNP_524017.1 CARD 18..106 CDD:260018
CASc 186..443 CDD:237997 56/255 (22%)
Casp4NP_446188.2 CARD_CASP1-like 5..85 CDD:260036
CASc 122..371 CDD:214521 57/257 (22%)
Blue background indicates that the domain is not in the aligned region.

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