DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dronc and casp20

DIOPT Version :9

Sequence 1:NP_524017.1 Gene:Dronc / 39173 FlyBaseID:FBgn0026404 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001129724.1 Gene:casp20 / 100192215 ZFINID:ZDB-GENE-081022-114 Length:347 Species:Danio rerio


Alignment Length:412 Identity:97/412 - (23%)
Similarity:158/412 - (38%) Gaps:102/412 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KRHREHIRKNLNILVEWTNYE-RLAMECVQQGILTVQMLRNTQDLNGKPFNMDEKDVRVEQHRRL 75
            |...:.|.::...|::..:.| ...::.|||..|..|     :|.|    |:.:...|..:..:|
Zfish     4 KESTQRILQHKVFLIDTLSVEASFILQNVQQAKLITQ-----RDYN----NLSDVSERETKIIKL 59

  Fly    76 LLKITQRGPTAYNLLINALRNINCLDAAVLLESVDESDSRPPFISLNERRTSRKSADIVDTPSPE 140
            |.|:..||.......|:.||.                                            
Zfish    60 LDKLIGRGEETCQQFIDLLRQ-------------------------------------------- 80

  Fly   141 ASEGPCVSKLRNEPLGALTPYVGVVDGPEVKKSKKIHGGDSAILGTYKMQSRFNRGVLLMVNIMD 205
                .||  |.|.|         |::|      ..|.......:..||: ::..||:.:::|.:|
Zfish    81 ----DCV--LENFP---------VLEG------HAIFASSVQEVSQYKI-TQNPRGICVIINNVD 123

  Fly   206 YPDQNRRRIGAEKDSKSLIHLFQELNFTIFPYGNVNQDQFFKLLTMVTSSSYVQNTECFVMVLMT 270
            :.....|| |:::|.|.|..:|:.|.|.:..:.|....:...:|..:   ....:.:|||..:::
Zfish   124 FTSMKERR-GSDEDQKYLAKVFRWLGFEVVAHRNKTAAEMKNILQAL---GRTVDGDCFVCCVLS 184

  Fly   271 HGNSVEGKEKVEFCDGSVVDMQKIKDHFQTAKCPYLVNKPKVLMFPFCRGDEYDLGHPKNQGNLM 335
            ||.    ||.|...|||:|.:.:|:|.|....|..||.|||:.....|||....|.         
Zfish   185 HGM----KEGVCGTDGSLVSVDEIRDPFTGINCQKLVGKPKLFFIQACRGQRKQLR--------- 236

  Fly   336 EPVYTAQEEKWPDTQTE----GIPSPSTNVPSLADTLVCYANTPGYVTHRDLDTGSWYIQKFCQV 396
               ..||.:...|.::|    |.....| :||..|.|:..:.|.|:|::|..|.|||:||..|:.
Zfish   237 ---VNAQADGPGDGESEMEVDGDDFDIT-IPSDTDFLIARSTTDGHVSYRKPDEGSWFIQSLCRN 297

  Fly   397 MADHAH-DTDLEDILKKTSEAV 417
            :..|.. ..|:..||...:..|
Zfish   298 LEKHCPLGADILTILLSVNNEV 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DroncNP_524017.1 CARD 18..106 CDD:260018 20/88 (23%)
CASc 186..443 CDD:237997 68/237 (29%)
casp20NP_001129724.1 CARD 10..82 CDD:260018 20/128 (16%)
CASc 106..343 CDD:237997 68/236 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587214
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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