DRSC/TRiP Functional Genomics Resources

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Protein Alignment nudE and Nde1

DIOPT Version :10

Sequence 1:NP_001097569.1 Gene:nudE / 39169 FlyBaseID:FBgn0036059 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_075806.2 Gene:Nde1 / 67203 MGIID:1914453 Length:344 Species:Mus musculus


Alignment Length:368 Identity:121/368 - (32%)
Similarity:180/368 - (48%) Gaps:62/368 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ESPPMFNSVEDECRYWKERSKQYHKEWTDVKQEYDEFVEQSREMEIEMDATLDQKQSIIKDLTAK 66
            :|...|.|.|:|..||::.:..|.:...:.::|..||.|.|||.|.|::|.|.|.::..:||.::
Mouse     3 DSGKTFESEEEETNYWRDLAMTYKQRAENTQEELREFQEGSREYEAELEAQLQQIETRNRDLLSE 67

  Fly    67 LTMFERENESLKLKLE---SHGI-DMSNMEKQLETVKKDRDTMKVYLRQLEQKNDDLERAHRILN 127
            ......|.||:|.|.|   |.|. .:|.:|..|...|..:|.::.|:|:|||.|||||||.|...
Mouse    68 NNRLRMELESVKEKFEMQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQANDDLERAKRATI 132

  Fly   128 ESIENFEKMLDQAYEKNALLELEVDEKGLLQEKLQRLMDETRDLKQELNV-----KSRFTPVVNG 187
            .|:|:||:.|:||.|:||.||.|:|||..|.|.:|||.||.|||:|||.|     |.|       
Mouse   133 MSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQELAVQQKQDKPR------- 190

  Fly   188 TSVPTANDTNTVNSSMNSSASLPNGIVANGELVKHDNAVATRATSVSVNALNGSLVNRNEYNQQH 252
            |.:|.:......:.::.::.|:|:            ..||.|..|   :.||...:.|       
Mouse   191 TPMPGSGQAKRTDMAVQATGSVPS------------TPVAHRGPS---SGLNTPGMFR------- 233

  Fly   253 SLKNPENQINGNSMNPSSRTTALNIVADMLRKLNWDKALLCPECEKFRCMCERPASVQPPP---- 313
              :..::..:|..:.|::|.:|||||.|:|||:...::.|. .|..| ...:.|:....|.    
Mouse   234 --RGLDSSTSGTPLTPAARISALNIVGDLLRKVGALESKLA-SCRNF-MYDQSPSRTSGPASGRG 294

  Fly   314 ----------PPSAS---EASLFRRAFGGSSS---SVATSSAQ 340
                      |.|.|   :.|..|..||..:|   |.|..|||
Mouse   295 TKNRDGVDRRPGSTSVGDKGSGKRLEFGKPASEPASPALPSAQ 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nudENP_001097569.1 GAS <73..>167 CDD:464001 47/97 (48%)
NUDE_C 129..>208 CDD:461464 34/83 (41%)
Nde1NP_075806.2 Self-association 1..93 30/89 (34%)
SMC_prok_B <26..>186 CDD:274008 70/159 (44%)
Interaction with PAFAH1B1 88..156 31/67 (46%)
NUDE_C 134..309 CDD:461464 62/207 (30%)
Interaction with CENPF 167..290 41/155 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..246 15/95 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..337 13/57 (23%)

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