DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6707 and Pip4p1

DIOPT Version :9

Sequence 1:NP_648372.1 Gene:CG6707 / 39168 FlyBaseID:FBgn0036058 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001014255.1 Gene:Pip4p1 / 364298 RGDID:1307475 Length:284 Species:Rattus norvegicus


Alignment Length:277 Identity:125/277 - (45%)
Similarity:164/277 - (59%) Gaps:20/277 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ADPERQSLINK--DDGNGYNSVDAVDEGADNPGSNSSVATNEDGNGA----------PTAVPCIG 54
            ||.||..|:::  |.|.|.|.:......|..||...:.:....|.|.          |...|.:.
  Rat     3 ADGERSPLLSEAGDGGAGGNGLAGPGGSATGPGGGLTPSAPPYGAGKHAPPQAFPPFPEGHPAVL 67

  Fly    55 PDELPPPYQ--QSTNTGGVPMVTCRVCQHMIDITTKREQHVVKCTHCNEATPIRNAPAGKKYVRC 117
            |.|.||||.  .|.::|..||:||||||..|::..|..||||||..|||||||:|||.|||||||
  Rat    68 PGEDPPPYSPLTSPDSGSAPMITCRVCQSPINVEGKMHQHVVKCGVCNEATPIKNAPPGKKYVRC 132

  Fly   118 PCNCLLICKSSSQRIACPRPNCKRIINLA---PSPVTPPVPTMPGMCRVTCGHCSDTFLFNTY-H 178
            |||||||||.:|||||||||.|||||||.   |.|::|. |...|: ||.||||.:|||:..: .
  Rat   133 PCNCLLICKVTSQRIACPRPYCKRIINLGPVHPGPLSPE-PQPMGV-RVICGHCKNTFLWTEFTD 195

  Fly   179 NALARCPHCRKVSSVGSRFANSRAVMFAIVALVFLITGIAVTIGTYSIASDHGGMYFLYVALFVI 243
            ..||||||||||||:|.|:...|.:...::.|:..:|...:..||:..|..:||:|..:..:.::
  Rat   196 RTLARCPHCRKVSSIGRRYPRKRCICCFLLGLLLAVTATGLAFGTWKPAQQYGGIYAAWAFVILL 260

  Fly   244 SGCMLARSAYYFRLKVS 260
            :...|.|:.|:..:|||
  Rat   261 AVLCLGRALYWGCMKVS 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6707NP_648372.1 Tmemb_55A 3..260 CDD:286827 122/274 (45%)
Pip4p1NP_001014255.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82 23/78 (29%)
Tmemb_55A 4..277 CDD:286827 122/274 (45%)
CX5R motif 140..146 3/5 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354368
Domainoid 1 1.000 231 1.000 Domainoid score I2348
eggNOG 1 0.900 - - E1_KOG4684
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10279
Inparanoid 1 1.050 232 1.000 Inparanoid score I3346
OMA 1 1.010 - - QHG48644
OrthoDB 1 1.010 - - D1346704at2759
OrthoFinder 1 1.000 - - FOG0002563
OrthoInspector 1 1.000 - - otm45944
orthoMCL 1 0.900 - - OOG6_106114
Panther 1 1.100 - - LDO PTHR21014
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1921
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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