DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and CAPN2

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001739.3 Gene:CAPN2 / 824 HGNCID:1479 Length:700 Species:Homo sapiens


Alignment Length:736 Identity:326/736 - (44%)
Similarity:456/736 - (61%) Gaps:89/736 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 GRKATSARQNSVSKG-------------DFQSLRDSCLANGTMFEDPDFPATNASL------MYS 275
            |..|..|:....::|             |:::||:.||..||:|:||.|||..::|      .||
Human     3 GIAAKLAKDREAAEGLGSHDRAIKYLNQDYEALRNECLEAGTLFQDPSFPAIPSALGFKELGPYS 67

  Fly   276 RRPDRYYEWLRPGDIADDPQFFVEGYSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDF 340
            .: .|..||.||.:|..||||.:.|.:|.|:.||.|||||||||.|:||.:..:..||:|.:|.|
Human    68 SK-TRGIEWKRPTEICADPQFIIGGATRTDICQGALGDCWLLAAIASLTLNEEILARVVPLNQSF 131

  Fly   341 QENYAGIFHFKFWQYGKWVEVVIDDRLPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALK 405
            ||||||||||:|||||:|||||:||||||.:|||:::||.|.:|||||||||||||::|.||||.
Human   132 QENYAGIFHFQFWQYGEWVEVVVDDRLPTKDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALS 196

  Fly   406 GGTTCEAMEDFTGGVTEWYDIKEAPPNLFSIMMKAAERGSMMGCSLE----PDPHVLEAETPQGL 466
            ||.|.|..||||||:.|||::|:.|||||.|:.||.::||::|||::    .|.   ||.|.|.|
Human   197 GGATTEGFEDFTGGIAEWYELKKPPPNLFKIIQKALQKGSLLGCSIDITSAADS---EAITFQKL 258

  Fly   467 IRGHAYSITKVCLMDISTPNRQGKL-PMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGL 530
            ::|||||:|     ........|.| .:||:||||| :.||:|.|:|:.|.|..|....:|.:..
Human   259 VKGHAYSVT-----GAEEVESNGSLQKLIRIRNPWG-EVEWTGRWNDNCPSWNTIDPEERERLTR 317

  Fly   531 NFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNF 595
            ..: ||||||||.|||.|:.|:|||||:||:||.|    :.:||:::..:|.|..|.|||||||:
Human   318 RHE-DGEFWMSFSDFLRHYSRLEICNLTPDTLTSD----TYKKWKLTKMDGNWRRGSTAGGCRNY 377

  Fly   596 LETFWHNPQYIISLEDPDDEDDDGK--CTAIVALMQKNRRSKRNVGIDCLTIGFAIYHLTDRDMQ 658
            ..|||.||||:|.||:.|::::||:  ||.:|.|:||:||.:|.:|.|..||||.||.:      
Human   378 PNTFWMNPQYLIKLEEEDEDEEDGESGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEV------ 436

  Fly   659 VKPQGL----------NFFKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFII 713
              |:.|          |||....:..||..|||.|||..|||||||.|::|||||:||::|:|.|
Human   437 --PEELSGQTNIHLSKNFFLTNRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCI 499

  Fly   714 RVFSETRNNMEENDDEV-----GFGETDDRIAPSLPPPTPKEEDDPQRIALRRLFDSVAGSDEEV 773
            |||||.:.:.:..|||:     .|..::|.|            ||    ..||||..:||.|.|:
Human   500 RVFSEKKADYQAVDDEIEANLEEFDISEDDI------------DD----GFRRLFAQLAGEDAEI 548

  Fly   774 DWQELKRILDHSMRDVM-----VGSDGFSKDAVRSMVAMLDKDRSGRLGFEEFEALLTDIAKWRA 833
            ...||:.||    |.|:     :.|||||.:..:.||.|||.|.||:||.:||..|.|.|.|::.
Human   549 SAFELQTIL----RRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQK 609

  Fly   834 VFKLYDTRRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKVRTFIE 898
            :::..|..|:|:::.:.:|.||..||:.:..:|...:..|:...:..|.||:|:.|.:::.|..:
Human   610 IYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFK 674

  Fly   899 MFRERDTDNSDTAFFNLDDWL 919
            :|::.|.:|:.|...:|..||
Human   675 IFKQLDPENTGTIELDLISWL 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 163/306 (53%)
Calpain_III 574..721 CDD:279416 77/158 (49%)
EF-hand_7 759..825 CDD:290234 31/70 (44%)
EFh 761..826 CDD:298682 31/69 (45%)
FRQ1 827..>908 CDD:227455 20/80 (25%)
CAPN2NP_001739.3 Peptidase_C2 46..342 CDD:306994 163/306 (53%)
Domain III 345..514 83/180 (46%)
Calpain_III 363..507 CDD:307285 76/151 (50%)
Linker 515..529 2/13 (15%)
Domain IV 530..700 61/186 (33%)
EFh_PEF_CAPN2 533..700 CDD:320074 58/167 (35%)
EF-hand motif 533..561 CDD:320074 13/31 (42%)
EF-hand motif 576..605 CDD:320074 14/28 (50%)
EF-hand motif 606..636 CDD:320074 8/29 (28%)
EF-hand motif 642..670 CDD:320074 7/27 (26%)
EF-hand motif 672..700 CDD:320074 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 356 1.000 Domainoid score I986
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 643 1.000 Inparanoid score I809
Isobase 1 0.950 - 0 Normalized mean entropy S2747
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 1 1.000 - - mtm8590
orthoMCL 1 0.900 - - OOG6_100404
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1211.820

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