DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and capn12

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:XP_005173727.1 Gene:capn12 / 799247 ZFINID:ZDB-GENE-050419-245 Length:717 Species:Danio rerio


Alignment Length:729 Identity:257/729 - (35%)
Similarity:391/729 - (53%) Gaps:88/729 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 DFQSLRDSCLANGTMFEDPDFPATNASLMYSRRPD--RYYEWLRPGDIADDPQFFVEG-YSRFDV 306
            |::.|..:||.:..:|.|..|.|..:||.....||  :..:||||.:|..: ..|||| ....|:
Zfish    17 DYEVLLQTCLKSAVLFSDSVFAANQSSLGLPADPDPKKAVKWLRPKEITSN-AVFVEGTMGTTDI 80

  Fly   307 QQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVIDDRLPTYN 371
            .||:||:||||||.:.||...|||.:|:|..|...|:|||||.|||||||:|||||:|||||...
Zfish    81 CQGQLGNCWLLAALSCLTMHPTLFVKVVPAGQSLSESYAGIFRFKFWQYGEWVEVVVDDRLPVRE 145

  Fly   372 GELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEAPPN-LFS 435
            |.|::.:|...|||||||:|||||||.|||.:||||...|.|||||||:.....:...||. |:.
Zfish   146 GRLLFSYSRTSNEFWSALVEKAYAKLIGSYGSLKGGIISEGMEDFTGGIAYSLPVSSRPPRMLWK 210

  Fly   436 IMMKAAERGSMMGCSLEPDPHVLEAE-----TPQGLIRGHAYSITKVCLMDISTPNRQGKLP--- 492
            .:..|..|.|::.|.:    |....:     ||:|||:||||:||:.           ||:.   
Zfish   211 AITAALARNSLLSCFI----HATTVKDIGTVTPEGLIKGHAYAITET-----------GKVKKAS 260

  Fly   493 ----MIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVE 553
                ::|:||||| ..|:.|||||...:|.|:....|.::.|....|||||:|.:||...::.||
Zfish   261 EEVFLLRLRNPWG-FVEYCGPWSDKCKDWDFVDNTEKTKLELAKVEDGEFWISIEDFCRFYNTVE 324

  Fly   554 ICNLSPDSLT-EDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFWHNPQY--IISLEDPDDE 615
            :|::.|||:: |:.:.:|...|.:|:.:|.|....:|||.|.:.::||.||||  |:|.:|.||.
Zfish   325 MCSVDPDSMSGEESEDTSTSSWTLSLHQGTWVPMCSAGGSRRYPKSFWKNPQYQMILSEKDVDDH 389

  Fly   616 D-------DDG--------------------------KCTAIVALMQKNRRSKRNVGIDCLTIGF 647
            |       |||                          |||.:|.|:||.||.|..|..  |.|.|
Zfish   390 DYGEGEEGDDGGDGEEDEDVSLLPPVSKTSKPGEKKKKCTVLVELLQKYRRQKDKVNF--LYIAF 452

  Fly   648 AIYHLTDRDMQVKPQGLN--FFKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGE 710
            .||.:.. :::..|..|:  ||....:::||..:.:.|.|..:..|.||.|:|:.||:.||::||
Zfish   453 HIYKVPP-ELKDSPGSLDQQFFSSNRAISRSGKYRSIRSVWRKVHLEPGSYVILASTYRPNQQGE 516

  Fly   711 FIIRVFSETRNNMEENDDEVGFGETDDRIAPSLPPPTPKEEDDPQRIALRRLFDSVAGSDEEVDW 775
            |.:|::::|.|.....|    |..|::..|..:..|...|  |..|:  ::.|:..|||||.|:.
Zfish   517 FFLRIYTKTGNIQGFQD----FPCTNNYSAMVMSKPVLPE--DQYRV--QKWFEEKAGSDERVNA 573

  Fly   776 QELKRILDHSMRDVMVGSDGFSKDAVRSMVAMLDKDRSGRLGFEEFEALLTDIAKWRAVFKLYDT 840
            .:...:::    .|:........:..|.::...|....|||...:.|.||:.:...:::|..:|.
Zfish   574 VQFMNLVN----SVLEKDYELPLETCRQLIFGEDTGGRGRLDRAQAEKLLSSLRNLQSIFFQFDE 634

  Fly   841 RRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKVRTFIEMFRERDT 905
            ..:|::..|.|..|||:||...::.::..|..|:|:.|..:||..|:.|..:::...::: |.:|
Zfish   635 DSSGTMSPFELSLALNAAGVECDSVVVQMLWERFGAGEQYLPFYGFVSCVARLQVLFDLY-EAET 698

  Fly   906 DNSDTAFFNLDDWL 919
             |.:.....::.||
Zfish   699 -NQEVKDKGINAWL 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 138/311 (44%)
Calpain_III 574..721 CDD:279416 61/183 (33%)
EF-hand_7 759..825 CDD:290234 14/65 (22%)
EFh 761..826 CDD:298682 15/64 (23%)
FRQ1 827..>908 CDD:227455 20/80 (25%)
capn12XP_005173727.1 Peptidase_C2 32..327 CDD:279042 138/311 (44%)
Calpain_III 346..527 CDD:279416 61/183 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580196
Domainoid 1 1.000 78 1.000 Domainoid score I8692
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.810

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