DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and Capn9

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:XP_006531467.1 Gene:Capn9 / 73647 MGIID:1920897 Length:718 Species:Mus musculus


Alignment Length:719 Identity:317/719 - (44%)
Similarity:449/719 - (62%) Gaps:52/719 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 ARQNSVSKGDFQSLRDSCLANGTMFEDPDFPATNASLMYSRRPDRYYEWLRPGDIADDPQFFVEG 300
            ||....|...|:.||..||.:||:|||.||||:|.||.||.||...:.|.|||:|.:.|:|.:.|
Mouse    19 ARTIHSSGQSFEQLRQGCLQSGTLFEDADFPASNVSLFYSERPQVPFVWKRPGEIVEKPEFILGG 83

  Fly   301 YSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVIDD 365
            .:|.|:.||||||||||||.|:||.:.....||:|.||.|...|||||||:|||:.:|::|||||
Mouse    84 ATRTDICQGELGDCWLLAAIASLTLNQKALTRVVPQDQGFGSGYAGIFHFQFWQHSEWLDVVIDD 148

  Fly   366 RLPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEAP 430
            ||||:...|:::||.:.|||||||||||||||:|||||||||:..||||||||||.|.:.|:|||
Mouse   149 RLPTFKDRLVFLHSADHNEFWSALLEKAYAKLNGSYEALKGGSAIEAMEDFTGGVAENFQIREAP 213

  Fly   431 PNLFSIMMKAAERGSMMGCSLEP-DPHVLEAETPQGLIRGHAYSITKVCLMDISTPNRQG-KLPM 493
            .:.|.|:.||.:|||::|||::. :....||.|..|||:||||::|     .:...|..| ::.:
Mouse   214 EDFFEILEKALKRGSLLGCSIDTLNASESEARTSLGLIKGHAYTVT-----GLDQVNFHGQRIKL 273

  Fly   494 IRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLS 558
            ||:||||| ..||:|||||||||||.:....::.:|.....||||||:|:||..|||:||||||:
Mouse   274 IRVRNPWG-QVEWNGPWSDSSPEWRSVDLEEQKRLGHTALDDGEFWMAFKDFKIHFDKVEICNLT 337

  Fly   559 PDSLTEDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFWHNPQYIISLEDPDDEDDDGKCTA 623
            ||:|.:...|    :||:::.:|.|..|.|||||||||:|||.|||..:||.: .||..:| ||.
Mouse   338 PDALEDSALH----RWEVTIHQGSWVRGSTAGGCRNFLDTFWTNPQIKLSLTE-RDEGQEG-CTF 396

  Fly   624 IVALMQKNRRSKRNVGIDCLTIGFAIYHLTDRDMQVKPQGLNFFKYRASVARSPHFINTREVCAR 688
            :.|||||:||..:..|.:.||||:|||...|:|..:   ..:||:|.||:|||..|||.|||..|
Mouse   397 LAALMQKDRRRLKRFGANMLTIGYAIYQCPDKDGHL---SRDFFRYHASLARSKTFINLREVSER 458

  Fly   689 FKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNNMEENDDEVGFGETDDRIAPSLPPPTPKEEDD 753
            |:||||.|:::||||:|::|.:|.:|:|||.|....:.|:.:      |...|.||.|||:||:.
Mouse   459 FQLPPGDYILIPSTFEPHQEADFCLRIFSEKRAVTRDLDENI------DIDLPELPKPTPQEEET 517

  Fly   754 PQRIALRRLFDSVAGSDEEVDWQELKRILDHSM-RDVMVGSDGFSKDAVRSMVAMLDKDRSGRLG 817
            .:....|.||..|||.|.||..:||:.:|:..: :...:.....|..:.|::::::|...:|:|.
Mouse   518 EEEQQFRALFQRVAGEDMEVSAEELEYVLNAVLQKKTALKFKRLSLLSCRNIISLMDTSGNGKLE 582

  Fly   818 FEEFEALLTDIAKW----------------------------RAVFKLYDTRRTGSIDGFHLRGA 854
            ||||......:..|                            :.:|..:|..::|::..:.||.|
Mouse   583 FEEFRVFWDKLKHWMKAAVTPGQLPAATGPWALTSPCSTPWSQDLFLQFDVDKSGTMSSYELRTA 647

  Fly   855 LNSAGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKVRTFIEMFRERDTDNSDTAFFNLDDWL 919
            |.:||:.|...||..:..||...:.|:.|||:|.|.:::.....:|:.....|.|....|:::::
Mouse   648 LKAAGFQLGGHLLQLIVLRYADEDLQLDFDDYLNCLVRLENASRVFQSLSVKNKDFIHLNINEFI 712

  Fly   920 ERTI 923
            ..|:
Mouse   713 SLTM 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 166/297 (56%)
Calpain_III 574..721 CDD:279416 76/146 (52%)
EF-hand_7 759..825 CDD:290234 21/66 (32%)
EFh 761..826 CDD:298682 20/65 (31%)
FRQ1 827..>908 CDD:227455 22/108 (20%)
Capn9XP_006531467.1 Peptidase_C2 43..335 CDD:366222 166/297 (56%)
Calpain_III 347..496 CDD:238132 78/157 (50%)
EFh_PEF 523..718 CDD:355382 47/194 (24%)
EF-hand motif 523..550 CDD:320054 12/26 (46%)
EF-hand motif 565..594 CDD:320054 8/28 (29%)
EF-hand motif 595..653 CDD:320054 9/57 (16%)
EF-hand motif 659..687 CDD:320054 10/27 (37%)
EF-hand motif 689..718 CDD:320054 5/28 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 357 1.000 Domainoid score I968
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38208
Inparanoid 1 1.050 640 1.000 Inparanoid score I814
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 1 1.000 - - mtm8819
orthoMCL 1 0.900 - - OOG6_100404
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.870

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