DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and Capn12

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001104277.1 Gene:Capn12 / 60594 MGIID:1891369 Length:720 Species:Mus musculus


Alignment Length:693 Identity:258/693 - (37%)
Similarity:390/693 - (56%) Gaps:56/693 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 TSARQNSVSKG-DFQSLRDSCLANGTMFEDPDFPATNASLMYSR-RPD----RYYEWLRPGDIAD 292
            |.|....:.|| :::::|.:||.:|.:|.||.|||...:|.|.: .||    :..||.||.:...
Mouse    19 TGAGGPQLFKGQNYEAIRRACLDSGILFRDPCFPAGPDALGYDKLGPDSEKAKGVEWKRPHEFCA 83

  Fly   293 DPQFFVEGYSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGK 357
            :|||..|..||.||.||.||:||||||||:||....|.:||:||.|.||:.|||:|||:.||:|:
Mouse    84 EPQFICEDMSRTDVCQGSLGNCWLLAAAASLTLYPRLLYRVVPPGQGFQDGYAGVFHFQLWQFGR 148

  Fly   358 WVEVVIDDRLPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTE 422
            ||:||:||:||...|:|:::.|.::||||:.||||||||||||||.::||...||..||||||.|
Mouse   149 WVDVVVDDKLPVREGKLMFVRSEQRNEFWAPLLEKAYAKLHGSYEVMRGGHMNEAFVDFTGGVGE 213

  Fly   423 WYDIKEAPPNLFSIMMKAAERGSMMGCSLEPDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNR 487
            ...:::..|.:|:.:..|..:.|::|.:...|..  |..|.:||::|||||:|....|.:...  
Mouse   214 VLYLRQNTPGVFAALRHALAKESLVGATALSDRG--EIRTDEGLVKGHAYSVTGTHKMSLGFT-- 274

  Fly   488 QGKLPMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRV 552
              |:.::|:|||||. .|||||||||.|.|..:|...::.: |....||||||..||||.||:.|
Mouse   275 --KVRLLRLRNPWGR-VEWSGPWSDSCPRWDMLPSEWRDAL-LVKKEDGEFWMELQDFLTHFNTV 335

  Fly   553 EICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFWHNPQYIISLEDPDDEDD 617
            :||:|||:.|........   |.:.:|:|.|..|..:||.:...|.||.|||:.::|.:||:|:|
Mouse   336 QICSLSPEVLGPSPAGGG---WHIHIFQGRWVRGFNSGGSQPSAENFWTNPQFRLTLLEPDEEED 397

  Fly   618 DG------------------------KCTAIVALMQKNRRSKRNVGIDCLTIGFAIYHLTDR--D 656
            |.                        |||.:::|:|:|||..|..|:..||:||.::.:.:.  |
Mouse   398 DDDEEGPWGGWGAAGARGPARGGRVPKCTVLLSLIQRNRRCLRAKGLTYLTVGFHVFQIPEELLD 462

  Fly   657 MQVKPQGLNFFKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRN 721
            :...|:............||. |...|:|..|.:|||||||:|||.....:|.:|.:|:|||..:
Mouse   463 LWDSPRSRALLPGLLRADRSV-FCARRDVSRRCRLPPGHYLVVPSASRVGDEADFTLRIFSERSH 526

  Fly   722 NMEENDDEVGFGETDDRIAPSLPPPTPKEEDDPQRIALRRLFDSVAGSDEEVDWQELKRILDHSM 786
            ...|.||.:. .:.|...||.          .|..:.|.:||..:||.:||::..:|:.::..::
Mouse   527 TAVEIDDVIS-ADLDALQAPY----------KPLELELAQLFLELAGEEEELNALQLQTLISIAL 580

  Fly   787 RDVMVGSDGFSKDAVRSMVAMLD-KDRSGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFH 850
            ......:....:..:|:...::. ..|..||....|:.|...:..|:|.|..:|...:|:::...
Mouse   581 EPARANTRTPGEIGLRTCEQLVQCFGRGQRLSLHHFQELWGHLMSWQATFDKFDEDASGTMNSCE 645

  Fly   851 LRGALNSAGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKV 893
            ||.||.:||:||||:|..:|..||.....::.|:.|:.||.::
Mouse   646 LRLALTAAGFHLNNQLTQSLTSRYRDSRLRVDFERFVCCAARL 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889 144/300 (48%)
Calpain_III 579..716 CDD:460050 53/162 (33%)
EFh_PEF_CalpA_B 758..925 CDD:320071 37/137 (27%)
EF-hand motif 758..786 CDD:320071 8/27 (30%)
EF-hand motif 799..829 CDD:320071 6/30 (20%)
EF-hand motif 830..860 CDD:320071 10/29 (34%)
EF-hand motif 866..894 CDD:320071 8/28 (29%)
EF-hand motif 895..925 CDD:320071
Capn12NP_001104277.1 Peptidase_C2 46..339 CDD:459889 144/300 (48%)
Domain III 342..541 62/203 (31%)
Calpain_III 352..531 CDD:238132 57/182 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 393..415 4/21 (19%)
Domain IV 542..720 40/157 (25%)
EFh_PEF 568..720 CDD:355382 30/121 (25%)
EF-hand motif 597..624 CDD:320054 5/26 (19%)
EF-hand motif 625..654 CDD:320054 9/28 (32%)
EF-hand motif 661..689 CDD:320054 8/28 (29%)
EF-hand motif 691..719 CDD:320054
Blue background indicates that the domain is not in the aligned region.

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