DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and Capn12

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001104277.1 Gene:Capn12 / 60594 MGIID:1891369 Length:720 Species:Mus musculus


Alignment Length:693 Identity:258/693 - (37%)
Similarity:390/693 - (56%) Gaps:56/693 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 TSARQNSVSKG-DFQSLRDSCLANGTMFEDPDFPATNASLMYSR-RPD----RYYEWLRPGDIAD 292
            |.|....:.|| :::::|.:||.:|.:|.||.|||...:|.|.: .||    :..||.||.:...
Mouse    19 TGAGGPQLFKGQNYEAIRRACLDSGILFRDPCFPAGPDALGYDKLGPDSEKAKGVEWKRPHEFCA 83

  Fly   293 DPQFFVEGYSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGK 357
            :|||..|..||.||.||.||:||||||||:||....|.:||:||.|.||:.|||:|||:.||:|:
Mouse    84 EPQFICEDMSRTDVCQGSLGNCWLLAAAASLTLYPRLLYRVVPPGQGFQDGYAGVFHFQLWQFGR 148

  Fly   358 WVEVVIDDRLPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTE 422
            ||:||:||:||...|:|:::.|.::||||:.||||||||||||||.::||...||..||||||.|
Mouse   149 WVDVVVDDKLPVREGKLMFVRSEQRNEFWAPLLEKAYAKLHGSYEVMRGGHMNEAFVDFTGGVGE 213

  Fly   423 WYDIKEAPPNLFSIMMKAAERGSMMGCSLEPDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNR 487
            ...:::..|.:|:.:..|..:.|::|.:...|..  |..|.:||::|||||:|....|.:...  
Mouse   214 VLYLRQNTPGVFAALRHALAKESLVGATALSDRG--EIRTDEGLVKGHAYSVTGTHKMSLGFT-- 274

  Fly   488 QGKLPMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRV 552
              |:.::|:|||||. .|||||||||.|.|..:|...::.: |....||||||..||||.||:.|
Mouse   275 --KVRLLRLRNPWGR-VEWSGPWSDSCPRWDMLPSEWRDAL-LVKKEDGEFWMELQDFLTHFNTV 335

  Fly   553 EICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFWHNPQYIISLEDPDDEDD 617
            :||:|||:.|........   |.:.:|:|.|..|..:||.:...|.||.|||:.::|.:||:|:|
Mouse   336 QICSLSPEVLGPSPAGGG---WHIHIFQGRWVRGFNSGGSQPSAENFWTNPQFRLTLLEPDEEED 397

  Fly   618 DG------------------------KCTAIVALMQKNRRSKRNVGIDCLTIGFAIYHLTDR--D 656
            |.                        |||.:::|:|:|||..|..|:..||:||.::.:.:.  |
Mouse   398 DDDEEGPWGGWGAAGARGPARGGRVPKCTVLLSLIQRNRRCLRAKGLTYLTVGFHVFQIPEELLD 462

  Fly   657 MQVKPQGLNFFKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRN 721
            :...|:............||. |...|:|..|.:|||||||:|||.....:|.:|.:|:|||..:
Mouse   463 LWDSPRSRALLPGLLRADRSV-FCARRDVSRRCRLPPGHYLVVPSASRVGDEADFTLRIFSERSH 526

  Fly   722 NMEENDDEVGFGETDDRIAPSLPPPTPKEEDDPQRIALRRLFDSVAGSDEEVDWQELKRILDHSM 786
            ...|.||.:. .:.|...||.          .|..:.|.:||..:||.:||::..:|:.::..::
Mouse   527 TAVEIDDVIS-ADLDALQAPY----------KPLELELAQLFLELAGEEEELNALQLQTLISIAL 580

  Fly   787 RDVMVGSDGFSKDAVRSMVAMLD-KDRSGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFH 850
            ......:....:..:|:...::. ..|..||....|:.|...:..|:|.|..:|...:|:::...
Mouse   581 EPARANTRTPGEIGLRTCEQLVQCFGRGQRLSLHHFQELWGHLMSWQATFDKFDEDASGTMNSCE 645

  Fly   851 LRGALNSAGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKV 893
            ||.||.:||:||||:|..:|..||.....::.|:.|:.||.::
Mouse   646 LRLALTAAGFHLNNQLTQSLTSRYRDSRLRVDFERFVCCAARL 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 144/300 (48%)
Calpain_III 574..721 CDD:279416 57/172 (33%)
EF-hand_7 759..825 CDD:290234 13/66 (20%)
EFh 761..826 CDD:298682 13/65 (20%)
FRQ1 827..>908 CDD:227455 23/67 (34%)
Capn12NP_001104277.1 Peptidase_C2 46..339 CDD:279042 144/300 (48%)
Domain III 342..541 62/203 (31%)
Calpain_III 352..531 CDD:238132 57/182 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 393..415 4/21 (19%)
Domain IV 542..720 40/157 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836660
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.850

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