DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and capn2b

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001018177.1 Gene:capn2b / 563053 ZFINID:ZDB-GENE-050522-84 Length:696 Species:Danio rerio


Alignment Length:727 Identity:306/727 - (42%)
Similarity:432/727 - (59%) Gaps:67/727 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 GRKATSARQNSVSKG-------------DFQSLRDSCLANGTMFEDPDFPATNASLMY-----SR 276
            |..:|.|::.:::.|             ||::||..|.|.||:|.||.|||...||.:     :.
Zfish     3 GIASTVAKKRALAAGFGTNANATKYLNQDFEALRSECRARGTLFSDPTFPAAPESLGFKELGPNS 67

  Fly   277 RPDRYYEWLRPGDIADDPQFFVEGYSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQ 341
            ...|...|.|||::...|:|.|.|.::.|:.||.|||||||||.|:|||:..:..||:|..|:|.
Zfish    68 SKTRGLVWKRPGELCQKPRFIVGGATKTDICQGALGDCWLLAAIASLTQNEDVLARVVPNGQEFD 132

  Fly   342 ENYAGIFHFKFWQYGKWVEVVIDDRLPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKG 406
            ..|||||||:|||:|:||:||||||||..:|||::::|.||||||||||||||||::|.||||.|
Zfish   133 GTYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELLFVYSAEKNEFWSALLEKAYAKVNGCYEALSG 197

  Fly   407 GTTCEAMEDFTGGVTEWYDIKEAPPNLFSIMMKAAERGSMMGCSLE----PDPHVLEAETPQGLI 467
            |:|.|..||||||:.|.|:|::||.|||.|:.||.|.|:::|||::    .|.   ||.|.|.|:
Zfish   198 GSTSEGFEDFTGGIAESYEIRKAPTNLFQIIQKALEAGALLGCSIDITSAADS---EAITRQKLV 259

  Fly   468 RGHAYSITKVCLMDISTPNRQGKLPMIRMRNPWGNDAEWSGPWSDSSPEWRFI-----PEHTKEE 527
            :|||||:|..  .:::...|:.||  :||||||| ..||:|.|||:||||..:     |:.:.| 
Zfish   260 KGHAYSLTGA--TEVNYRGRKEKL--VRMRNPWG-QVEWTGAWSDNSPEWNSVAASERPDASAE- 318

  Fly   528 IGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSGVTAGGC 592
                   ||||||:|.:||.::.|:|||.|:||::|:|    |.:.|.::..:|.|..|.|||||
Zfish   319 -------DGEFWMAFSEFLTNYSRIEICTLTPDAITDD----SVKHWAVTNHDGTWRRGSTAGGC 372

  Fly   593 RNFLETFWHNPQYIISLEDPDDEDDDGKCTAIVALMQKNRRSKRNVGIDCLTIGFAIYHLT---- 653
            ||...|||.|||:::.|::.:.||.:..|:.:|.|:|||||..|..|.|..|||||||.|.    
Zfish   373 RNNPYTFWMNPQFVVKLDEENVEDKEKGCSFVVGLIQKNRRRLRKTGEDMNTIGFAIYELPQEFH 437

  Fly   654 -DRDMQVKPQGLNFFKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFS 717
             .|::.:..   |||......|||..|||.||||.||.||||.||||||||:.|::|:|.:||||
Zfish   438 GQREVHLDK---NFFLTHGQKARSETFINLREVCTRFHLPPGEYLIVPSTFEANKDGDFCLRVFS 499

  Fly   718 ETRNNMEENDDEVGFGETDDRIAPSLPPPTPKEEDDPQRIALRRLFDSVAGSDEEVDWQELKRIL 782
            |:::..:..||.|.....|:.::           ||......|.:|..:||.|.|:...||..|.
Zfish   500 ESQSETQHCDDPVDAELPDETVS-----------DDQVDSKFRGMFVKLAGPDMEISPLELMTIF 553

  Fly   783 DHSM-RDVMVGSDGFSKDAVRSMVAMLDKDRSGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSI 846
            :..: :...:.|..|:.|..|.||.::|...:|:||..||..|...:.::..:||..|...:|:|
Zfish   554 NKIIAKRTDIKSSTFTLDTCRVMVNLMDDSGNGKLGLGEFATLWKKVQRYLEIFKHNDLDSSGTI 618

  Fly   847 DGFHLRGALNSAGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKVRTFIEMFRERDTDNSDTA 911
            ....||.||..||:.|||.|...:..||..::..:.||:|:.|.:::......|:..|...|...
Zfish   619 STPELRMALKEAGFCLNNTLFQLMVARYAEKDMTLLFDNFVSCLMRLEMMFRAFKRLDPHKSGFI 683

  Fly   912 FFNLDDWLERTI 923
            ..|.:.||..|:
Zfish   684 ELNFNQWLNLTM 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889 156/309 (50%)
Calpain_III 579..716 CDD:460050 70/141 (50%)
EFh_PEF_CalpA_B 758..925 CDD:320071 50/167 (30%)
EF-hand motif 758..786 CDD:320071 9/27 (33%)
EF-hand motif 799..829 CDD:320071 11/29 (38%)
EF-hand motif 830..860 CDD:320071 10/29 (34%)
EF-hand motif 866..894 CDD:320071 7/27 (26%)
EF-hand motif 895..925 CDD:320071 7/29 (24%)
capn2bNP_001018177.1 Peptidase_C2 46..339 CDD:459889 155/308 (50%)
Calpain_III 359..498 CDD:460050 70/141 (50%)
EFh_PEF 530..696 CDD:355382 50/166 (30%)
EF-hand motif 530..557 CDD:320054 9/26 (35%)
EF-hand motif 572..601 CDD:320054 10/28 (36%)
EF-hand motif 602..631 CDD:320054 9/28 (32%)
EF-hand motif 638..666 CDD:320054 7/27 (26%)
EF-hand motif 668..696 CDD:320054 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.

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