DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and capn7

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001128580.1 Gene:capn7 / 556792 ZFINID:ZDB-GENE-111111-1 Length:815 Species:Danio rerio


Alignment Length:751 Identity:161/751 - (21%)
Similarity:258/751 - (34%) Gaps:292/751 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 PAAPLAPYPSAMPGLPGMPMPYAPMPTSPAPQHNIGFPALPYPTA--PPPESAPTQEEEPSV--- 208
            ||:...|..||..| |.....:.|:    .|..:|...|.|...|  ..|:......||..|   
Zfish   157 PASQDKPGSSASKG-PAQVRQFFPL----GPDFSIHDKAQPVRAAQSSEPQGQRYTAEEIEVLRK 216

  Fly   209 -----GVAELSFTSV--------KVPENQNMFWMGRKATSARQNSVSKGDFQSLRDSCLANGTMF 260
                 |:..:.|.||        .||.:..   .|:.|.|.:|.::                   
Zfish   217 TSKVNGIEYVPFMSVDLRERFAFPVPFSDK---CGKLALSPKQRAI------------------- 259

  Fly   261 EDPDFPATNASLMYSRRPDRYYEWLRPGDIADDPQFFVEGYSRFDVQQGELGDCWLLA-----AA 320
                         :||       |:||.||.::|. .:...|.|.::|..:.||..:|     ||
Zfish   260 -------------FSR-------WVRPDDICNNPT-MIFTVSSFSIKQTVVSDCSFVASLAISAA 303

  Fly   321 ANLTQDSTLFFRVIPPDQ---DFQENYAGIFHFKFWQYGKWVEVVIDDRLPT-YNGELIYMHSTE 381
            ........|...:|.|..   :.:.|..|.:..|....|...:|:|||.||. .||||:..:|:.
Zfish   304 YERRYSKKLITSIIYPQNRKGEPEYNPCGKYMVKLHINGVPRKVIIDDFLPVDRNGELLCSYSSN 368

  Fly   382 KNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTG--------GVTEWYDIKEA--------- 429
            :||.|.:|:||||.|:.|.|             ||.|        .:|.|...:.|         
Zfish   369 RNELWVSLIEKAYMKVMGGY-------------DFPGSNSNIDLHALTGWIPERIAMHSDNQSFN 420

  Fly   430 PPNLFSIMMKAAERGSMMGCSLEPDPHVLEAETPQ--GLIRGHAYSITKVCLMDISTPNRQGK-L 491
            ..:.|.::.:...||.::   :.....|:..|..:  ||:..|||::     :||    ||.| .
Zfish   421 KDDTFRMLYQRFHRGDVL---ITTATGVMTEEEGERWGLVPTHAYAV-----LDI----RQYKDK 473

  Fly   492 PMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFD-------RDGEFWMSFQDFLNHF 549
            ..::::|||.: ..|.|.:|:.. |..:.|:..|.   ||||       .:|.||:.::|...::
Zfish   474 RFLQLKNPWSH-LRWKGSYSERD-EKNWTPDLLKY---LNFDPKTAQKFDNGVFWIIWEDLCQYY 533

  Fly   550 DRV-------------------------------------------------------------- 552
            |.:                                                              
Zfish   534 DVIYLSWNPALFKESSCIHSSWDGKQGPVKDVYSLANNPQYKLEVQCPQGGAAVWVLLTRHITDK 598

  Fly   553 -------EICNL--------------------------SPDSLTE------------------DQ 566
                   |...|                          ||..||:                  ::
Zfish   599 DDFAQNREFITLVVYKTNGKKVYYPAEPPPYIDGIRINSPHYLTKIKLTSPGTHTFTLVVSQYEK 663

  Fly   567 QHS---SRRKWEMSMF---------------EGEWTSGVTAGGCRNFLETFWHNPQYIISLEDPD 613
            |::   :.|.:.:..|               .|:| .|.:||||.|:.:|:.:||.|.:::|.|.
Zfish   664 QNTINYTLRVYSVCKFNFSKIPTPFTNTKRINGQW-KGASAGGCGNYKDTYKNNPIYQLNMEKPG 727

  Fly   614 DEDDDGKCTAIVALMQKNRRSKR-NVGIDCLTIGFAIYHLTDRDMQVKPQGLNFFKYRASVARSP 677
                        .|:.:.|.|:: :||.:.:|:.      |..|     .|.:.|:.|||.....
Zfish   728 ------------PLLIELRGSRQYSVGFEVVTVS------TTGD-----SGSSGFQKRASGDYRC 769

  Fly   678 HFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFII 713
            .|. ..||   ..||.|.|.::|:||.|.:||.|.:
Zfish   770 GFC-YMEV---ESLPAGIYNVIPTTFLPKQEGPFFL 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403 23/93 (25%)
Drf_FH1 37..189 CDD:283903 11/39 (28%)
Peptidase_C2 260..556 CDD:279042 85/400 (21%)
Calpain_III 574..721 CDD:279416 42/156 (27%)
EF-hand_7 759..825 CDD:290234
EFh 761..826 CDD:298682
FRQ1 827..>908 CDD:227455
capn7NP_001128580.1 MIT 5..76 CDD:294211
MIT 85..159 CDD:294211 1/1 (100%)
CysPc 216..540 CDD:238004 94/396 (24%)
Calpain_III 570..682 CDD:294111 9/111 (8%)
calpain_III 689..812 CDD:214786 41/141 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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