DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and capns1a

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001017899.2 Gene:capns1a / 550598 ZFINID:ZDB-GENE-030113-3 Length:216 Species:Danio rerio


Alignment Length:201 Identity:66/201 - (32%)
Similarity:111/201 - (55%) Gaps:8/201 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   733 GETD-DRIAPSLPPPTPK------EEDDPQRIALRRLFDSVAGSDEEVDWQELKRILDHSM-RDV 789
            |..| ::..||.|||..:      ..:..:....|::|:.:||.|.||...||..||:..: :..
Zfish    16 GNIDPNQFVPSEPPPPRRPLAYAVSNESAEEQQFRKVFNQLAGDDMEVSPTELMNILNKIISKHG 80

  Fly   790 MVGSDGFSKDAVRSMVAMLDKDRSGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGA 854
            .:.:|||:.::.|||||::|.|.:|:|||.||:.|..:|.||:.::|.||...:|:|....|..|
Zfish    81 DLKTDGFTIESCRSMVAVMDSDSTGKLGFHEFKHLWNNIKKWQGIYKTYDRDHSGTIGADELPAA 145

  Fly   855 LNSAGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKVRTFIEMFRERDTDNSDTAFFNLDDWL 919
            ..:||:.|.::|...:..||....|.:.||:::.|.:::......|:..|.||..|...|:.:||
Zfish   146 FRAAGFPLTDQLFQMIIRRYSDESGNMDFDNYIGCLVRLDAMCHAFKTLDKDNDGTIKVNVQEWL 210

  Fly   920 ERTIYS 925
            :.|:||
Zfish   211 QLTMYS 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889
Calpain_III 579..716 CDD:460050
EFh_PEF_CalpA_B 758..925 CDD:320071 57/167 (34%)
EF-hand motif 758..786 CDD:320071 11/27 (41%)
EF-hand motif 799..829 CDD:320071 14/29 (48%)
EF-hand motif 830..860 CDD:320071 10/29 (34%)
EF-hand motif 866..894 CDD:320071 7/27 (26%)
EF-hand motif 895..925 CDD:320071 9/29 (31%)
capns1aNP_001017899.2 EFh_PEF_CPNS1_2 48..216 CDD:320063 57/167 (34%)
EF-hand motif 48..76 CDD:320063 11/27 (41%)
EF-hand motif 90..120 CDD:320063 14/29 (48%)
EF-hand motif 121..151 CDD:320063 10/29 (34%)
EF-hand motif 157..185 CDD:320063 7/27 (26%)
EF-hand motif 186..216 CDD:320063 9/29 (31%)
Blue background indicates that the domain is not in the aligned region.

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