DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and capns1

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001016161.1 Gene:capns1 / 548915 XenbaseID:XB-GENE-6039680 Length:234 Species:Xenopus tropicalis


Alignment Length:193 Identity:71/193 - (36%)
Similarity:109/193 - (56%) Gaps:10/193 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   741 PSLPPPTP-----KEEDDPQRIALRRLFDSVAGSDEEVDWQELKRILDHSM---RDVMVGSDGFS 797
            |..|||..     :..:..:....||||..:||.|.||...||..||:..:   :|:.  :||||
 Frog    44 PQPPPPRSHPSVIQSNESEETRQFRRLFSQLAGDDMEVSATELMGILNKVIAKHQDLK--TDGFS 106

  Fly   798 KDAVRSMVAMLDKDRSGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGALNSAGYHL 862
            .|:.|||||::|.|.:|:||||||:.|..:|.||:.|:|.|||.|:|:|....|.||..:||:.|
 Frog   107 ADSCRSMVAVMDSDSTGKLGFEEFKYLWDNIKKWQGVYKRYDTDRSGTIGRNELPGAFTAAGFQL 171

  Fly   863 NNRLLNALAHRYGSREGQIPFDDFLMCAIKVRTFIEMFRERDTDNSDTAFFNLDDWLERTIYS 925
            |.:|.:.:..||...:|.:.||:::.|.:::......|:..|.|........:.:||:.|:||
 Frog   172 NGQLYDMIIRRYSDEKGDMDFDNYICCLVRLDAMFRAFKTLDKDGDGQIKVTIQEWLQLTMYS 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889
Calpain_III 579..716 CDD:460050
EFh_PEF_CalpA_B 758..925 CDD:320071 65/169 (38%)
EF-hand motif 758..786 CDD:320071 13/27 (48%)
EF-hand motif 799..829 CDD:320071 16/29 (55%)
EF-hand motif 830..860 CDD:320071 14/29 (48%)
EF-hand motif 866..894 CDD:320071 7/27 (26%)
EF-hand motif 895..925 CDD:320071 6/29 (21%)
capns1NP_001016161.1 EFh_PEF_CPNS1_2 66..234 CDD:320063 65/169 (38%)
EF-hand motif 66..94 CDD:320063 13/27 (48%)
EF-hand motif 108..138 CDD:320063 16/29 (55%)
EF-hand motif 139..169 CDD:320063 14/29 (48%)
EF-hand motif 175..203 CDD:320063 7/27 (26%)
EF-hand motif 204..234 CDD:320063 6/29 (21%)
Blue background indicates that the domain is not in the aligned region.

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