DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and capn5

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001006736.1 Gene:capn5 / 448405 XenbaseID:XB-GENE-947203 Length:642 Species:Xenopus tropicalis


Alignment Length:511 Identity:204/511 - (39%)
Similarity:294/511 - (57%) Gaps:63/511 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 FQSLRDSCLANGTMFEDPDFPATNASLMYSRRPDRYYEWLRPGDIADDPQFFVEGYSRFDVQQGE 310
            :|:|:..|.:...:||||.|||.|.:|.|..:..:..:|.||.:...||..||:|.|..|:.||:
 Frog    13 YQALKKECQSKKVLFEDPVFPANNDALFYKTQRVQGVQWKRPKEFCTDPHLFVDGISSHDLHQGQ 77

  Fly   311 LGDCWLLAAAANLTQDSTLFFRVIPPDQDFQEN---------YAGIFHFKFWQYGKWVEVVIDDR 366
            :|:||.:||.::|.....|:.:|||   |::|.         |||||||.||::|:||:||||||
 Frog    78 VGNCWFIAACSSLASREQLWQKVIP---DWKEQEWYADKPQIYAGIFHFHFWKFGEWVDVVIDDR 139

  Fly   367 LPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEA-- 429
            |||.|.:|||.||.||||.|.||:|||||||.|.||||.||.|.:|:.||||||:|..::.|.  
 Frog   140 LPTINNQLIYCHSNEKNELWCALVEKAYAKLAGCYEALDGGNTADALVDFTGGVSEPIELTEGHF 204

  Fly   430 ------PPNLFSIMMKAAERGSMMGCSLE-PDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNR 487
                  ..:||..::|...||.::.||:. .....:||....||::||||::|.|..:      |
 Frog   205 VTDVEKRNDLFERVLKVHNRGGLISCSIRATSASDMEARMACGLVKGHAYAVTDVRKV------R 263

  Fly   488 QG----------KLPMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSF 542
            .|          ||.||||||||| :.||:|||||||.||:.:.:..:|::|:..:.||||||:|
 Frog   264 LGHGLLAFFKSEKLEMIRMRNPWG-EREWNGPWSDSSEEWQKVSKSEREKLGVTVEDDGEFWMTF 327

  Fly   543 QDFLNHFDRVEICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSGV-----TAGGCRNFLETFWHN 602
            :||..::..:.:|.|...|..     |..:.||.::....|....     .:|||.||..|:..|
 Frog   328 EDFCKYYTDIIMCRLINTSYL-----SIHKTWEEAVLRSSWVQHQDPLQNRSGGCLNFKATYLQN 387

  Fly   603 PQYIISLEDPDDEDDDGKCTAIVALMQKNRRSKRNVG-IDCLTIGFAIYHLTDRDMQVKPQGLNF 666
            ||::..::.|:||       .:|.|.||.:|:.|..| .:.|.|||.| |..:.:.:.:...|  
 Frog   388 PQFVFDVKKPEDE-------VLVCLQQKTKRTTRQEGKAENLAIGFEI-HQVELNRRFRMHTL-- 442

  Fly   667 FKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNN 722
               :..|| |..:||:|.|..|..|..|.|:|:|:||||...|||::|||::..:|
 Frog   443 ---QPKVA-SSIYINSRCVFLRTDLKEGRYVIIPTTFDPGHTGEFLLRVFTDLPSN 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 144/323 (45%)
Calpain_III 574..721 CDD:279416 52/152 (34%)
EF-hand_7 759..825 CDD:290234
EFh 761..826 CDD:298682
FRQ1 827..>908 CDD:227455
capn5NP_001006736.1 Peptidase_C2 27..341 CDD:395523 144/323 (45%)
Calpain_III 362..488 CDD:395848 48/139 (35%)
C2_Calpain 515..640 CDD:176011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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