DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and capn5

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001006736.1 Gene:capn5 / 448405 XenbaseID:XB-GENE-947203 Length:642 Species:Xenopus tropicalis


Alignment Length:511 Identity:204/511 - (39%)
Similarity:294/511 - (57%) Gaps:63/511 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 FQSLRDSCLANGTMFEDPDFPATNASLMYSRRPDRYYEWLRPGDIADDPQFFVEGYSRFDVQQGE 310
            :|:|:..|.:...:||||.|||.|.:|.|..:..:..:|.||.:...||..||:|.|..|:.||:
 Frog    13 YQALKKECQSKKVLFEDPVFPANNDALFYKTQRVQGVQWKRPKEFCTDPHLFVDGISSHDLHQGQ 77

  Fly   311 LGDCWLLAAAANLTQDSTLFFRVIPPDQDFQEN---------YAGIFHFKFWQYGKWVEVVIDDR 366
            :|:||.:||.::|.....|:.:|||   |::|.         |||||||.||::|:||:||||||
 Frog    78 VGNCWFIAACSSLASREQLWQKVIP---DWKEQEWYADKPQIYAGIFHFHFWKFGEWVDVVIDDR 139

  Fly   367 LPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEA-- 429
            |||.|.:|||.||.||||.|.||:|||||||.|.||||.||.|.:|:.||||||:|..::.|.  
 Frog   140 LPTINNQLIYCHSNEKNELWCALVEKAYAKLAGCYEALDGGNTADALVDFTGGVSEPIELTEGHF 204

  Fly   430 ------PPNLFSIMMKAAERGSMMGCSLE-PDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNR 487
                  ..:||..::|...||.::.||:. .....:||....||::||||::|.|..:      |
 Frog   205 VTDVEKRNDLFERVLKVHNRGGLISCSIRATSASDMEARMACGLVKGHAYAVTDVRKV------R 263

  Fly   488 QG----------KLPMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSF 542
            .|          ||.||||||||| :.||:|||||||.||:.:.:..:|::|:..:.||||||:|
 Frog   264 LGHGLLAFFKSEKLEMIRMRNPWG-EREWNGPWSDSSEEWQKVSKSEREKLGVTVEDDGEFWMTF 327

  Fly   543 QDFLNHFDRVEICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSGV-----TAGGCRNFLETFWHN 602
            :||..::..:.:|.|...|..     |..:.||.::....|....     .:|||.||..|:..|
 Frog   328 EDFCKYYTDIIMCRLINTSYL-----SIHKTWEEAVLRSSWVQHQDPLQNRSGGCLNFKATYLQN 387

  Fly   603 PQYIISLEDPDDEDDDGKCTAIVALMQKNRRSKRNVG-IDCLTIGFAIYHLTDRDMQVKPQGLNF 666
            ||::..::.|:||       .:|.|.||.:|:.|..| .:.|.|||.| |..:.:.:.:...|  
 Frog   388 PQFVFDVKKPEDE-------VLVCLQQKTKRTTRQEGKAENLAIGFEI-HQVELNRRFRMHTL-- 442

  Fly   667 FKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNN 722
               :..|| |..:||:|.|..|..|..|.|:|:|:||||...|||::|||::..:|
 Frog   443 ---QPKVA-SSIYINSRCVFLRTDLKEGRYVIIPTTFDPGHTGEFLLRVFTDLPSN 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889 144/323 (45%)
Calpain_III 579..716 CDD:460050 48/142 (34%)
EFh_PEF_CalpA_B 758..925 CDD:320071
EF-hand motif 758..786 CDD:320071
EF-hand motif 799..829 CDD:320071
EF-hand motif 830..860 CDD:320071
EF-hand motif 866..894 CDD:320071
EF-hand motif 895..925 CDD:320071
capn5NP_001006736.1 Peptidase_C2 27..341 CDD:459889 144/323 (45%)
Calpain_III 359..488 CDD:460050 48/142 (34%)
C2_Calpain 515..640 CDD:176011
Blue background indicates that the domain is not in the aligned region.

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