DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and capn2

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:XP_031757476.1 Gene:capn2 / 448035 XenbaseID:XB-GENE-993758 Length:703 Species:Xenopus tropicalis


Alignment Length:717 Identity:317/717 - (44%)
Similarity:454/717 - (63%) Gaps:52/717 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 ARQNSVSKG-------------DFQSLRDSCLANGTMFEDPDFPATNASLMYSRRPDRYYE---- 283
            |::.:::.|             |:::||:.||.:||:|:|..|||.::||.:........:    
 Frog     9 AKERALASGLGTNEKALPYLSQDYEALRNECLQSGTLFKDLSFPAIHSSLGFKELGQHSAKCQGV 73

  Fly   284 -WLRPGDIADDPQFFVEGYSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGI 347
             |.||.|:..||||...|.:|.|:.||.|||||||||.|:||.:..:..||:|.||.||||||||
 Frog    74 VWKRPKDLCPDPQFIAGGATRTDICQGALGDCWLLAAIASLTLNEQILSRVVPKDQSFQENYAGI 138

  Fly   348 FHFKFWQYGKWVEVVIDDRLPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEA 412
            |||:|||||:||:|||||||||.:|:|:::||.|.:||||||:|||||||:||||||.||||.|.
 Frog   139 FHFQFWQYGEWVDVVIDDRLPTKDGKLLFVHSAEGSEFWSALMEKAYAKLNGSYEALSGGTTTEG 203

  Fly   413 MEDFTGGVTEWYDIKEAPPNLFSIMMKAAERGSMMGCSLE-PDPHVLEAETPQGLIRGHAYSITK 476
            .||||||:.|||::::||||||.|:.||...||::|||:: ......||.|.|.|::|||||:|.
 Frog   204 FEDFTGGLAEWYELRKAPPNLFKIIQKALRTGSLLGCSIDITSAAETEAITFQKLVKGHAYSVTA 268

  Fly   477 VCLMDISTPNRQGKL-PMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWM 540
            .     .....:|.| .:||:||||| :.||:|.|||:|.||..:....:|::....| ||||||
 Frog   269 A-----EEVQYRGNLEKLIRIRNPWG-EVEWTGAWSDNSSEWNSVDPDVREKLIKRCD-DGEFWM 326

  Fly   541 SFQDFLNHFDRVEICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFWHNPQY 605
            ||.|||.::.|:|||||:||:|..|:.    .||.::..:|.|..|.||||||||.||||.||||
 Frog   327 SFNDFLRNYSRLEICNLTPDTLASDKY----SKWSLTKMDGTWRRGSTAGGCRNFPETFWMNPQY 387

  Fly   606 IISLEDPDDEDDDGK--CTAIVALMQKNRRSKRNVGIDCLTIGFAIYHLT-----DRDMQVKPQG 663
            :|.||:.||:.||.:  ||.||.|:|||||.:|.:|.|..|||||||.:.     .:|:::....
 Frog   388 VIKLEEADDDPDDNEEGCTFIVGLIQKNRRKQRKMGEDMHTIGFAIYEVPPQLTGQKDIRLSRDY 452

  Fly   664 LNFFKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNNMEENDD 728
            :...|.|   .:|..:||.|||..||:||||.|:|:||||:|::.|:|.:||||| :|...:..|
 Frog   453 ILRNKIR---EKSDTYINLREVLNRFRLPPGEYVILPSTFEPHKVGDFCLRVFSE-KNAESKCQD 513

  Fly   729 EVGFGETDDRIAPSLPPPTPKEEDDPQRIALRRLFDSVAGSDEEVDWQELKRILDH--SMRDVMV 791
            .|    .||.|...:.....::..||.   .:|:|.::||.|:|:...||..||..  |.|: .:
 Frog   514 RV----PDDEIKADIDEDVNEDAIDPN---FKRMFLALAGDDKEISPHELFNILQKVISKRE-DI 570

  Fly   792 GSDGFSKDAVRSMVAMLDKDRSGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGALN 856
            .|||||.:..|::|.:||.|.:|:||.:||:.|.|.|.|::.::...|...:|:|:.:.:||||.
 Frog   571 KSDGFSIETCRTIVDLLDSDGTGKLGLKEFKILWTKILKYQKIYSSVDRDHSGTINSYEMRGALE 635

  Fly   857 SAGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKVRTFIEMFRERDTDNSDTAFFNLDDWLER 921
            :||..:|:.:...|..|:...:..|.||:|:.|.:::....::|.:.||:.:......:|.||..
 Frog   636 AAGIKVNSTINELLVARFADEDHTIDFDNFVRCLLRLEIMFKIFNQMDTEKTGVVTLKMDTWLSL 700

  Fly   922 TI 923
            |:
 Frog   701 TV 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889 161/302 (53%)
Calpain_III 579..716 CDD:460050 71/143 (50%)
EFh_PEF_CalpA_B 758..925 CDD:320071 55/168 (33%)
EF-hand motif 758..786 CDD:320071 10/29 (34%)
EF-hand motif 799..829 CDD:320071 12/29 (41%)
EF-hand motif 830..860 CDD:320071 9/29 (31%)
EF-hand motif 866..894 CDD:320071 7/27 (26%)
EF-hand motif 895..925 CDD:320071 7/29 (24%)
capn2XP_031757476.1 Peptidase_C2 46..342 CDD:459889 161/302 (53%)
Calpain_III 361..502 CDD:460050 71/143 (50%)
EFh_PEF 537..703 CDD:355382 55/167 (33%)
EF-hand motif 537..564 CDD:320054 10/26 (38%)
EF-hand motif 579..608 CDD:320054 12/28 (43%)
EF-hand motif 609..638 CDD:320054 8/28 (29%)
EF-hand motif 645..673 CDD:320054 7/27 (26%)
EF-hand motif 675..703 CDD:320054 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.