DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and capn1

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_998624.1 Gene:capn1 / 406768 ZFINID:ZDB-GENE-040426-2814 Length:704 Species:Danio rerio


Alignment Length:698 Identity:310/698 - (44%)
Similarity:438/698 - (62%) Gaps:46/698 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 DFQSLRDSCLANGTMFEDPDFPATNASLMYSRRPDRY-----YEWLRPGDIADDPQFFVEGYSRF 304
            |:::||.....:..:||||.|.|:::||.::....|.     ..|:||.::...|||.|:|.:|.
Zfish    36 DYETLRAQSQQSRRLFEDPMFTASSSSLGFNELGPRSSKTQGVRWMRPKEMCARPQFIVDGATRT 100

  Fly   305 DVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVIDDRLPT 369
            |:.||.|||||||||.|:||.:..|..||:|..|||...|||||||:|||:|:||:|||||||||
Zfish   101 DICQGALGDCWLLAAIASLTLNDNLLHRVVPHGQDFDSRYAGIFHFQFWQFGEWVDVVIDDRLPT 165

  Fly   370 YNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEAPPNLF 434
            .:|:|:::||.|..||||||||||||||:|.||||.||:|||..|||||||||.|::|:||.:||
Zfish   166 KDGKLLFVHSAEGGEFWSALLEKAYAKLNGCYEALSGGSTCEGFEDFTGGVTEMYELKKAPADLF 230

  Fly   435 SIMMKAAERGSMMGCSLE-PDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNRQGKLPMIRMRN 498
            ||:.:|.||||::|||:: .....:||.|.:.|::|||||:|..    .....|.....::|:||
Zfish   231 SIIGRAIERGSLLGCSIDITSKFDMEAVTFKKLVKGHAYSVTGA----EEVVYRGNMTKLVRIRN 291

  Fly   499 PWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLT 563
            ||| :.||:|.|||:|.||..:....:..: .|...||||||||.|||..|.|:|||||:.|:| 
Zfish   292 PWG-EVEWTGAWSDNSREWDNVDRSVRGRL-QNRSEDGEFWMSFSDFLREFTRLEICNLTADAL- 353

  Fly   564 EDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFWHNPQYIISLEDPDDEDDDGKCTAIVALM 628
               |.|..:||..:.:.|||..|.|||||||:..|||:|||:.::|:.| |.....:|:.:||||
Zfish   354 ---QASQVKKWSTANYNGEWRRGSTAGGCRNYPATFWNNPQFKVALKHP-DSPGQSECSFLVALM 414

  Fly   629 QKNRRSKRNVGIDCLTIGFAIYH-----LTDRDMQVKPQGLNFFKYRASVARSPHFINTREVCAR 688
            ||:||.||..|.|..|||||||.     |....:.:|   .:||...||.|||..|||.|||.:|
Zfish   415 QKDRRKKRREGQDMETIGFAIYEVPREFLGQSGVHLK---RDFFLTHASSARSELFINLREVSSR 476

  Fly   689 FKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNNMEENDDEVGFGETDDRIAPSLPPPTPKEE-- 751
            |:||.|.|:||||||:||:|.:|::|||||...|.||.||:|             ....|:|:  
Zfish   477 FRLPAGEYIIVPSTFEPNKEADFVLRVFSEKPANSEEMDDKV-------------MAEIPEEQRL 528

  Fly   752 DDPQRIA-LRRLFDSVAGSDEEVDWQELKRILDHSM---RDVMVGSDGFSKDAVRSMVAMLDKDR 812
            |:.|..| .:.||..:||:|.|:...||:.||:..:   :|:.  :|||.|::.|||:.::|.|.
Zfish   529 DESQIDAGFKSLFRQLAGADMEISVTELQTILNRIIAKHKDLK--TDGFGKESCRSMINLVDTDG 591

  Fly   813 SGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGSR 877
            ||:||..||..|...|.::..:|:.:|..::|::..:.:|.||.:||:.|||.|...:..||...
Zfish   592 SGKLGLVEFHVLWEKIKRYLQIFRDHDVDKSGTMSSYEMRKALETAGFKLNNHLFQLIILRYTEE 656

  Fly   878 EGQIPFDDFLMCAIKVRTFIEMFRERDTDNSDTAFFNLDDWLERTIYS 925
            :..:.||:|:.|.:::.|..:.|:..|||...........|:..|:::
Zfish   657 DLSVDFDNFVSCLVRLETMFKTFKSLDTDADGVISLTFFQWITLTMFA 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 158/301 (52%)
Calpain_III 574..721 CDD:279416 77/151 (51%)
EF-hand_7 759..825 CDD:290234 26/68 (38%)
EFh 761..826 CDD:298682 27/67 (40%)
FRQ1 827..>908 CDD:227455 24/80 (30%)
capn1NP_998624.1 Peptidase_C2 51..347 CDD:279042 158/301 (52%)
Calpain_III 361..509 CDD:279416 77/151 (51%)
EF-hand_8 547..606 CDD:290545 23/60 (38%)
EFh 580..634 CDD:238008 17/53 (32%)
EF-hand_7 612..698 CDD:290234 23/85 (27%)
EFh 613..692 CDD:298682 23/78 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 358 1.000 Domainoid score I921
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 656 1.000 Inparanoid score I755
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 1 1.000 - - mtm6388
orthoMCL 1 0.900 - - OOG6_100404
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.870

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