DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and capn1a

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:XP_068081046.1 Gene:capn1a / 393417 ZFINID:ZDB-GENE-040426-1263 Length:705 Species:Danio rerio


Alignment Length:697 Identity:328/697 - (47%)
Similarity:448/697 - (64%) Gaps:45/697 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 DFQSLRDSCLANGTMFEDPDFPATNASLMYSR-----RPDRYYEWLRPGDIADDPQFFVEGYSRF 304
            |:::||..||..|.:||||.|||...||.:..     ...|..||:||.::.|||||.|.|.:|.
Zfish    34 DYEALRQECLEGGYLFEDPCFPAEPPSLGFKELAPHSSKTRDVEWMRPTELCDDPQFIVGGATRT 98

  Fly   305 DVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVIDDRLPT 369
            |:.||.|||||||||..:||.:..|..||:|..|.||::|||||||:|||:|:||:||||||||.
Zfish    99 DICQGALGDCWLLAAIGSLTLNERLLHRVVPHGQSFQDDYAGIFHFQFWQFGEWVDVVIDDRLPV 163

  Fly   370 YNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEAPPNLF 434
            .:|||:::||.|.|||||||:|||||||:||||||.||:|.|..|||||||:|.|::::||.:|:
Zfish   164 KDGELMFVHSAEGNEFWSALVEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPRDLY 228

  Fly   435 SIMMKAAERGSMMGCSLE-PDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNRQGKLPMIRMRN 498
            .|:.||.:|||::|||:: .....:|:.|.:.|::|||||:|  .|..:....|..:|  ||:||
Zfish   229 RIISKALDRGSLLGCSIDITSAFDMESVTFKKLVKGHAYSVT--ALKQVEYRGRMERL--IRIRN 289

  Fly   499 PWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLT 563
            ||| ..||:|.|||:||||..|....|:::.|..: ||||||||.:||..|.|:|||||:||:|:
Zfish   290 PWG-QVEWTGAWSDNSPEWDEIDPSEKDDLHLQME-DGEFWMSFGEFLRQFSRLEICNLTPDALS 352

  Fly   564 EDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFWHNPQYIISL--EDPDDEDDDGKCTAIVA 626
            :|..    ..|....|.|.|..|.|||||||...|||.||||.|:|  ||.|.||::..|:.:||
Zfish   353 DDDM----SHWNTIKFHGAWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDEEVACSFLVA 413

  Fly   627 LMQKNRRSKRNVGIDCLTIGFAIYHLTD------RDMQVKPQGLNFFKYRASVARSPHFINTREV 685
            ||||:||..|..|.|..|||||||.:..      :::.:|.   :||...:|.|||..|||.|||
Zfish   414 LMQKDRRRYRRHGQDMHTIGFAIYEVRSQWYTGCQNVHLKK---DFFLSNSSAARSETFINLREV 475

  Fly   686 CARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNNMEENDDEVGFG-ETDDRIAPSLPPPTPK 749
            ..|.:||||.|:||||||:|::|.:|::|||:|.::..||.|||:... |.::.|       |..
Zfish   476 STRLRLPPGEYIIVPSTFEPSKEADFVLRVFTEKQSETEELDDEISADLEDEEEI-------TED 533

  Fly   750 EEDDPQRIALRRLFDSVAGSDEEVDWQELKRILDHSM---RDVMVGSDGFSKDAVRSMVAMLDKD 811
            :.||    :.:.||..:||.|.|:...|||.||:..:   :||.  :||||.|:.|:||.:||||
Zfish   534 DIDD----SFKSLFAQLAGEDMEISVHELKTILNRVVSKHKDVK--TDGFSMDSCRTMVNLLDKD 592

  Fly   812 RSGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGS 876
            .|.|||..||:.|...|.|...:|:.:|..::|::..:.:|.|:.|||:.|||||...|..||..
Zfish   593 GSARLGLVEFQILWNKIRKLLGIFREFDIDKSGTMSSYEMRLAVESAGFKLNNRLNQILVARYAE 657

  Fly   877 REGQIPFDDFLMCAIKVRTFIEMFRERDTDNSDTAFFNLDDWLERTI 923
            .|. |.||:|:.|.||:......|::.|.:.:.||..||.:||..|:
Zfish   658 NEA-IDFDNFVCCLIKLEAMFRSFQQLDREETGTAEMNLSEWLFMTM 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889 161/301 (53%)
Calpain_III 579..716 CDD:460050 73/144 (51%)
EFh_PEF_CalpA_B 758..925 CDD:320071 67/169 (40%)
EF-hand motif 758..786 CDD:320071 11/27 (41%)
EF-hand motif 799..829 CDD:320071 15/29 (52%)
EF-hand motif 830..860 CDD:320071 8/29 (28%)
EF-hand motif 866..894 CDD:320071 12/27 (44%)
EF-hand motif 895..925 CDD:320071 9/29 (31%)
capn1aXP_068081046.1 Peptidase_C2 49..345 CDD:459889 161/301 (53%)
Calpain_III 358..516 CDD:238132 78/160 (49%)
EFh_PEF_CAPN1 538..705 CDD:320073 67/169 (40%)
EF-hand motif 538..566 CDD:320073 11/27 (41%)
EF-hand motif 581..610 CDD:320073 14/28 (50%)
EF-hand motif 611..641 CDD:320073 8/29 (28%)
EF-hand motif 647..674 CDD:320073 12/27 (44%)
EF-hand motif 676..705 CDD:320073 9/28 (32%)
Blue background indicates that the domain is not in the aligned region.

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