DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and Capn13

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001028616.1 Gene:Capn13 / 381122 MGIID:2685789 Length:665 Species:Mus musculus


Alignment Length:728 Identity:223/728 - (30%)
Similarity:341/728 - (46%) Gaps:125/728 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 DFQSLRDSCLANGTMFEDPDFPATNAS----LMYSRRPDRYYEWLRPGDIADD-----PQFFVEG 300
            ||::|||.||:.|.:|.|..|||..:|    |:..:...: .||.||  .:.|     |.|.:||
Mouse    16 DFRTLRDHCLSRGQLFIDDTFPAAASSIGEKLLRGKHLSK-LEWKRP--TSKDLPFYPPHFILEG 77

  Fly   301 YSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVIDD 365
            .||||:.||..||||.|||..:|||:.....::: .||.:...|||||.|:|||.|:||||||||
Mouse    78 ASRFDIHQGIAGDCWFLAALGSLTQNPQCLQKIL-MDQSYSHQYAGIFQFRFWQCGQWVEVVIDD 141

  Fly   366 RLPTYNGELIYMHSTEKN-EFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEA 429
            :||......:::|....| |||..|:|||||||.|||..|..|...:|:.|.||||....::..:
Mouse   142 QLPVIGDNFLFVHPRGGNKEFWPCLMEKAYAKLLGSYSQLHYGYLPDALVDLTGGVVTIINLHSS 206

  Fly   430 PPNLFSIMMKAAERGSMMGCSLE----PDPHVLEAETPQGLIRGHAYSIT---KVCLMDISTPNR 487
            |.:|.:.:..|.:.|||:.|:.|    .:..|:|    .||:..|||::|   |:        ..
Mouse   207 PFDLLTTVKTAIQAGSMVACATENGLTEEAKVME----NGLVSQHAYTVTGAEKI--------QY 259

  Fly   488 QGKL-PMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDR 551
            ||:. .:||:.||||. .||.|.|.|.|.|||...:..|.::..| ..|||||||.|||..:|..
Mouse   260 QGRWEDIIRLWNPWGK-TEWKGRWKDGSKEWRETHDPRKSQLYEN-KEDGEFWMSCQDFQENFSC 322

  Fly   552 VEICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFWHNPQYIISLEDPDDED 616
            :.|||..|  :|.|...:....|....|..:..|...|||       ...:.||:.|::    |.
Mouse   323 LFICNQIP--ITMDHGVTPNESWRQMRFTNQVISRNRAGG-------HGRDMQYVFSVQ----EH 374

  Fly   617 DDGKCTAIVA--LMQKNRRSKRNVGIDCLTIGFAIYHLTDRDMQVKPQGLN--------FFKYRA 671
            ..|. ..:||  :|.::..::.    :...:.|.::.:        ||..|        ||....
Mouse   375 TAGN-NVVVAFTIMPQSLNTEE----ERFPLQFQVFKV--------PQFQNVQGRLPPAFFSPFR 426

  Fly   672 SVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNNMEENDDEVGFGETD 736
            |.|:...:::.......|.|.||.|::|  |....:|.||::|:|                    
Mouse   427 SAAQGTKYVSKCNFTKSFHLNPGTYVVV--TTANGKEVEFLLRIF-------------------- 469

  Fly   737 DRIAPSLPPPTPKEEDDPQRIALRRLFDSVA--GS---------DE--EVDWQELKRILDHSMRD 788
                  |..| .|..|......||.|.:|:.  ||         |:  ::|..:|:.:|:   ::
Mouse   470 ------LKMP-DKHRDPSSNFNLRALKESLPENGSRNSISYTYMDQGLDIDATQLQSLLN---QE 524

  Fly   789 VMVG--SDGFSKDAVRSMVAMLDKDRSGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHL 851
            .:.|  .|.||.|..:|::|::|...:|||..|||..|.:.:...:.:|:... ||.|.:....|
Mouse   525 FLTGPPGDTFSLDQCQSIMALMDLKVNGRLDQEEFARLRSRLIHCQHIFQSIQ-RRPGVLLSSDL 588

  Fly   852 RGALNS----AGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKVRTFIEMFRERDTDNSDTAF 912
            ...:.:    .|..:::.||:.:|.||....|::.|...:...|::.|..:.||....|... .:
Mouse   589 WKVIENTDFLVGIFISSELLSLMALRYSDSSGRVSFPTLVCFLIRLETMAKAFRNLSKDGKG-IY 652

  Fly   913 FNLDDWLERTIYS 925
            ....:|:...:||
Mouse   653 LTETEWMNLVMYS 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889 126/313 (40%)
Calpain_III 579..716 CDD:460050 32/146 (22%)
EFh_PEF_CalpA_B 758..925 CDD:320071 44/185 (24%)
EF-hand motif 758..786 CDD:320071 10/40 (25%)
EF-hand motif 799..829 CDD:320071 11/29 (38%)
EF-hand motif 830..860 CDD:320071 5/33 (15%)
EF-hand motif 866..894 CDD:320071 8/27 (30%)
EF-hand motif 895..925 CDD:320071 5/29 (17%)
Capn13NP_001028616.1 Peptidase_C2 31..327 CDD:459889 126/313 (40%)
Calpain_III 366..469 CDD:469636 27/121 (22%)
EFh_PEF_CAPN13_14 505..665 CDD:320070 38/164 (23%)
EF-hand motif 538..567 CDD:320070 10/28 (36%)
EF-hand motif 568..601 CDD:320070 5/33 (15%)
EF-hand motif 607..635 CDD:320070 8/27 (30%)
EF-hand motif 637..665 CDD:320070 4/28 (14%)
Blue background indicates that the domain is not in the aligned region.

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