DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and CalpC

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster


Alignment Length:730 Identity:215/730 - (29%)
Similarity:338/730 - (46%) Gaps:113/730 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 FQSLRDSCLANGTMFEDPDFPATNASLMYSRRPDRYYEWLRPGDIADD------------PQFFV 298
            ::.:...|.:...::|||||||..:|:.|.:.|...::|.|..|:||.            |.|..
  Fly     5 YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTFQWKRIMDLADSGSGAVAANSSAAPVFLN 69

  Fly   299 EGYSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVI 363
            |. :.|||..|::||.||::....|:....||:||:|.||.....: |:|.|:.|..|:||||::
  Fly    70 ES-AEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVPADQTLASAH-GVFRFRLWWCGEWVEVLV 132

  Fly   364 DDRLPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKE 428
            ||||||.||.|.:|.....|.||:||||||.|||||||||||.||..:.:.|..|||.....|..
  Fly   133 DDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQMPILS 197

  Fly   429 ---APPNLFSIMMKAAERGSMMGCSLEPDPHV----LEAETPQGLIRGHAY-------------- 472
               .|..|..::....    ::.|..:....|    |....|.|::....|              
  Fly   198 DNIRPQTLKELLTTTC----IVTCLADKSATVAKKNLAERMPNGILVNVNYRLSSLDKVKTLMGD 258

  Fly   473 SITKVCLMDISTPNRQGKLPMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTK----EEIGLNFD 533
            |:..|||.|..:            ..|:|....:.|.||..|..|..:.:..:    .::|    
  Fly   259 SVQLVCLKDTFS------------SKPFGEKTHFLGDWSPMSKTWERVSQVERARLIRQLG---- 307

  Fly   534 RDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQHSSR-RKWEMSMFEGEWTSGVTAGGCRNFLE 597
             .||||:||.||:..|..:|:..|..::..:::...|| ..|:|.|.:|:|..|||||||||. |
  Fly   308 -PGEFWLSFCDFVEIFSTMEVVYLDTETSNDEEMLKSRPLHWKMKMHQGQWKRGVTAGGCRNH-E 370

  Fly   598 TFWHNPQYIISLEDPDDEDDDGKCTAIVALMQKNRRSKRNVGIDCLTIGFAIYHLTDRDMQVKPQ 662
            :|..|||.:||::|..|        .::||.|       :..::...|||.:|......|..:..
  Fly   371 SFHINPQLLISVQDEQD--------LVIALNQ-------HTAVEPKVIGFTMYTWDGEYMLSECL 420

  Fly   663 GLNFFKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNNMEEND 727
            ..:|||...|...| .:.|||.|.....|..|||:::|:|::|.||..|.:|:            
  Fly   421 QKDFFKNHVSYLNS-DYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRI------------ 472

  Fly   728 DEVGFG-------ETDDRIAPSLPPPTPKEEDDPQRIA---------LRRLFDSVAGSDEEVDWQ 776
              :|.|       ||...|.  |.|....:..|.:|..         ...::..:|..::.::..
  Fly   473 --LGTGSFRLSCLETQTMIL--LDPFPALKSTDAERCGGPKVKSVCQYEPVYMQLADENKTINCF 533

  Fly   777 ELKRILDHSM-RDVMVGSDGFSKDAVRSMVAMLDKDRSGRLGFEEFEALLTDIAKWRAVFKLYDT 840
            ||..:|:..: .|.:.|....  |..|.::|:.|:..|||:.|::|:..:.::..|:.|||:|..
  Fly   534 ELHELLEACLPNDYIKGCANI--DICRQVIALQDRSGSGRITFQQFKTFMVNLKSWQGVFKMYTK 596

  Fly   841 RRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKVRTFIEMFRERDT 905
            .:.|.:....||.||...|:.|:..::|.|..||..::|.:...||:...|.:.|....|..::.
  Fly   597 EKAGILRAERLRDALCDIGFQLSTDIMNCLIQRYIRKDGTLRLSDFVSAVIHLTTAFNQFHLKNY 661

  Fly   906 DNSDTAFFNLDDWLE 920
            ...:....:|.||::
  Fly   662 GQVNVIEVHLHDWIK 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889 111/332 (33%)
Calpain_III 579..716 CDD:460050 48/136 (35%)
EFh_PEF_CalpA_B 758..925 CDD:320071 40/173 (23%)
EF-hand motif 758..786 CDD:320071 4/36 (11%)
EF-hand motif 799..829 CDD:320071 9/29 (31%)
EF-hand motif 830..860 CDD:320071 10/29 (34%)
EF-hand motif 866..894 CDD:320071 8/27 (30%)
EF-hand motif 895..925 CDD:320071 5/26 (19%)
CalpCNP_573118.2 CysPc 7..329 CDD:238004 112/344 (33%)
Calpain_III 346..483 CDD:238132 53/167 (32%)
EFh_PEF 515..680 CDD:355382 40/164 (24%)
EF-hand motif 515..543 CDD:320054 4/27 (15%)
EF-hand motif 556..585 CDD:320054 8/28 (29%)
EF-hand motif 586..615 CDD:320054 10/28 (36%)
EF-hand motif 622..650 CDD:320054 8/27 (30%)
EF-hand motif 652..680 CDD:320054 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.