DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and Capn7

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001025208.1 Gene:Capn7 / 306260 RGDID:1304855 Length:813 Species:Rattus norvegicus


Alignment Length:716 Identity:150/716 - (20%)
Similarity:243/716 - (33%) Gaps:265/716 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 PYAPMPTSPAPQHNIGFPALPYPTAPPPESAPTQEEEPSVGVAELSFTSVKVPENQNMFWMGRKA 233
            |..|.|....||..|.           |:|...|.::.:....|:..|:.|:             
  Rat   178 PLGPNPFLEKPQPFIS-----------PQSCDAQGQKYTAEEIEVLRTTSKI------------- 218

  Fly   234 TSARQNSVSKGDFQS--LRDS-------CLANGTMFEDPDFPATNASLMYSRRPDRYYEWLRPGD 289
                 |......|.|  ||:.       |...|.:...|...||            :.:|:||.|
  Rat   219 -----NGAEYVPFMSVDLRERFAYPMPFCDRLGKLPLSPKQKAT------------FSKWVRPED 266

  Fly   290 IADDPQFFVEGYSRFDVQQGELGDCWLLAAAANLTQDSTLFFR------VIPPDQDFQENY--AG 346
            :.::|. .:...|.|.::|..:.||..:|:.|........|.:      :.|.::|.:..|  .|
  Rat   267 LTNNPT-MIYTVSSFSIKQTIVSDCSFVASLAISAAYERRFNKKLITSIIYPQNKDGEPEYNPCG 330

  Fly   347 IFHFKFWQYGKWVEVVIDDRLPT-YNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTC 410
            .:..|....|...:|:|||:||. :.|||:..:|..|:|.|.:|:||||.|:.|.|: ..|..:.
  Rat   331 KYMVKLHLNGVPRKVIIDDQLPVDHKGELLCSYSNNKSELWVSLIEKAYMKVMGGYD-FPGSNSN 394

  Fly   411 EAMEDFTGGVTEWYDIKE-----APPNLFSIMMKAAERGSMM-----GCSLEPDPHVLEAETPQ- 464
            ..:...||.:.|...:..     :..:.|.::.:...:|.::     |.       :.|||..: 
  Rat   395 IDLHALTGWIPERIAMHSDSQTFSKDSSFRMLYQRFHKGDVLITASTGM-------MTEAEGEKW 452

  Fly   465 GLIRGHAYSITKVCLMDISTPNRQGK-LPMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEI 528
            ||:..|||::     :||    |:.| |..|:::|||.: ..|.|.:|::..: .:.||..|.  
  Rat   453 GLVPTHAYAV-----LDI----REFKGLRFIQLKNPWSH-LRWKGRYSENDVK-NWTPELQKY-- 504

  Fly   529 GLNFD-------RDGEFWMSFQDFLNHFDRV---------------------------------- 552
             ||||       .:|.||:|:.|...::|.|                                  
  Rat   505 -LNFDPRTAQKIDNGIFWISWDDLCQYYDVVYLSWNPALFKESTCIHSTWDAKQGPVKDAYSLAN 568

  Fly   553 -----------------------------------EICNL------------------------- 557
                                               |...:                         
  Rat   569 NPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMVVYKTDGKKVYYPADPAPYIDGIRI 633

  Fly   558 -SPDSLT-------------------EDQQ--HSSRRKWEMSMF---------------EGEWTS 585
             ||..||                   |.|.  |.:.|.:....|               .|:| |
  Rat   634 NSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTVRVYSACSFTFSKIPSPYTLSKRINGKW-S 697

  Fly   586 GVTAGGCRNFLETFWHNPQYIISLEDPDDEDDDGKCTAIVALMQKNRRSKRNVGIDCLTIGFAIY 650
            |.:||||.||.||..:||.|...:      |..|.     .|::.....:.:||.:.:.:..|  
  Rat   698 GQSAGGCGNFQETHKNNPIYQFHI------DKTGP-----LLIELRGPRQYSVGFEVVAVSIA-- 749

  Fly   651 HLTD---RDMQVKPQGLNFFKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFI 712
              .|   ...|.|..|    .||....    ::....:      |.|.:.::||||.|.:||.|.
  Rat   750 --GDPGPHGFQRKSSG----DYRCGFC----YLELENI------PAGIFNVIPSTFLPKQEGPFF 798

  Fly   713 I 713
            :
  Rat   799 L 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021 9/37 (24%)
Peptidase_C2 260..556 CDD:459889 85/392 (22%)
Calpain_III 579..716 CDD:460050 38/153 (25%)
EFh_PEF_CalpA_B 758..925 CDD:320071
EF-hand motif 758..786 CDD:320071
EF-hand motif 799..829 CDD:320071
EF-hand motif 830..860 CDD:320071
EF-hand motif 866..894 CDD:320071
EF-hand motif 895..925 CDD:320071
Capn7NP_001025208.1 MIT_calpain7_1 5..76 CDD:239144
MIT 85..157 CDD:469712
CysPc 214..538 CDD:238004 93/376 (25%)
calpain_III 687..810 CDD:214786 37/143 (26%)
Blue background indicates that the domain is not in the aligned region.

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