DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and Capn10

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_035926.2 Gene:Capn10 / 23830 MGIID:1344392 Length:666 Species:Mus musculus


Alignment Length:503 Identity:166/503 - (33%)
Similarity:235/503 - (46%) Gaps:78/503 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 MFEDPDFPATNASLMYSR-------RPDRYYEWLRPGDIADDPQFFVEGYSRFDVQQGELGDCWL 316
            :|.|..|||:::||.|:.       |.|  ..|.||.:|...||.|.:......|:||.|||||.
Mouse    13 LFRDAAFPASDSSLFYNLSTPLAQFRED--ITWRRPQEICATPQLFPDNPWEGQVKQGLLGDCWF 75

  Fly   317 LAAAANLTQDSTLFFRVIPPDQD--FQENYAGIFHFKFWQYGKWVEVVIDDRLPTYNGELIYMHS 379
            |.|.|.|.:...|..:|.||.|.  ..:.|.|.|..:.||:|.|.||.||||||...|.|.:...
Mouse    76 LCACAALQKSQHLLDQVFPPGQPGWSDQKYQGFFTCRIWQFGHWEEVTIDDRLPCLAGRLCFSRC 140

  Fly   380 TEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEAPPNLFSIMMKAA--- 441
            ..::.||..||||||||:|||||.|..|...:|:.|.||.:.|.:.:|:        :.||:   
Mouse   141 QREDVFWLPLLEKAYAKVHGSYEHLWAGQVADALVDLTGSLAERWSLKD--------VTKASGQQ 197

  Fly   442 ERGS-----------------MMGCS-LEPDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNRQ 488
            :|.|                 ::.|| |.|.....|      |...||:.|:.  |.::.:...|
Mouse   198 DRPSGGEHRTCRQLLHLKDRCLISCSVLSPRAGARE------LGEFHAFIISD--LQELRSQTGQ 254

  Fly   489 GKLPMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVE 553
            |.| ::|:.||||... |.|.|.:....|..: |..||...|...::||||:..::||..||.|.
Mouse   255 GIL-LLRIHNPWGRRC-WQGLWREGGEGWNQV-EPAKESELLAQLQEGEFWVEEEEFLREFDEVT 316

  Fly   554 ICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFWHNPQYIISLEDPDDEDDD 618
            |.....::......|:.|.........|.|.:|.:|||||| ...|..||::.:.|.:|.:    
Mouse   317 IGYPVTEAGHLQSLHTERVLCHTRTLPGAWVTGQSAGGCRN-NSCFPCNPKFWLRLLEPSE---- 376

  Fly   619 GKCTAIVALMQKNRRSKRNVGIDCLTIGF--AIYHLTDRDMQVKPQGLNFFKYRASVARSPHFIN 681
                ..||::|:.||  |.||......|.  |..:|..:|.|.  .||:.:|........|..::
Mouse   377 ----VCVAVLQRPRR--RLVGQTRALAGASPAPVNLPGKDYQA--VGLHIWKVEKRKISLPRVLS 433

  Fly   682 T------------REVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFS 717
            .            ||:..|.:|.||:||.|||||..:..|:|::||||
Mouse   434 APPVAGTACHAYDREIHLRCELSPGYYLAVPSTFLKDVPGQFLLRVFS 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 114/325 (35%)
Calpain_III 574..721 CDD:279416 50/158 (32%)
EF-hand_7 759..825 CDD:290234
EFh 761..826 CDD:298682
FRQ1 827..>908 CDD:227455
Capn10NP_035926.2 CysPc 8..319 CDD:238004 114/326 (35%)
Domain III 1 322..488 52/173 (30%)
calpain_III 338..488 CDD:214786 50/157 (32%)
Calpain_III 506..647 CDD:238132
Domain III 2 507..648
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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