DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and clp-6

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_500081.2 Gene:clp-6 / 190738 WormBaseID:WBGene00000546 Length:627 Species:Caenorhabditis elegans


Alignment Length:490 Identity:226/490 - (46%)
Similarity:306/490 - (62%) Gaps:26/490 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 FQSLRDSCLANGTMFEDPDFPATNASLMYSRRPDRYYEWLRPGDIADDPQFFVEGYSRFDVQQGE 310
            |...|..||....:||||.|||.|:|:.|.:.|..:..||||..|..:|:..|.|.|||||:||.
 Worm   144 FYEERQKCLDENRLFEDPQFPANNSSIYYKKPPKSHIVWLRPAKIFANPRLIVNGKSRFDVRQGS 208

  Fly   311 LGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVIDDRLPTYNGELI 375
            ||:||.|||||.|.|...||:||:||||.|.|||||||||:||:||:||:|||||||||.||:||
 Worm   209 LGNCWFLAAAATLAQRDELFYRVVPPDQSFTENYAGIFHFQFWRYGEWVDVVIDDRLPTVNGKLI 273

  Fly   376 YMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEAPPN-LFSIMMK 439
            ||.|.:.:|.|..|||||||||:|:||.|.||||.||:||||||:||:||:...... :.:::||
 Worm   274 YMSSQDGDECWGPLLEKAYAKLYGTYEHLDGGTTTEALEDFTGGLTEFYDLTSTDKTMILAMIMK 338

  Fly   440 AAERGSMMGCSLEPDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNRQGKLPMIRMRNPWGNDA 504
            ..:.||:..||::|||...||:...||:||||||:|.|..::..    :.|:.::|:||||| |.
 Worm   339 GMQMGSLFACSIDPDPREKEAQLANGLVRGHAYSVTGVHTVETD----KEKVALLRIRNPWG-DT 398

  Fly   505 EWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTE----- 564
            ||:|.|||.|..|..:.:..:|::......||||||...||:..|..::.||||.|.:.|     
 Worm   399 EWNGDWSDKSSLWEQVDQEQREKMEFRIKEDGEFWMCLDDFMAQFANLDCCNLSADVMHEITEMT 463

  Fly   565 --DQQHSSRRKWEMSMFEGEWTSGV-TAGGCRNFLETFWHNPQY--IISLEDPDDEDDDGKCTAI 624
              :......::|.....:|||.|.. |||||.|...||..||||  ......|...|   |||.|
 Worm   464 EIEVMEKQSKQWIQKSADGEWCSRKGTAGGCSNNENTFCTNPQYETYFRATSPSSND---KCTVI 525

  Fly   625 VALMQKNRRSKRNVGIDCLTIGFAIYHLTDRDMQVKPQGLNFFKYRASVARSPHFINTREVCARF 689
            .|:.||.||::.:.|:|.|.||.::|.::..:.:|..:   ..|..|.:|.:..|::.||...||
 Worm   526 AAVFQKYRRNQLHRGLDMLQIGLSVYKMSGPNEKVTAE---MMKTHAPIASTKLFVDYREAVVRF 587

  Fly   690 KLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNNME 724
            .:|||:|:|||.||:||.:.||::|.||    |:|
 Worm   588 TVPPGYYVIVPCTFEPNHDAEFLLRTFS----NVE 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889 155/296 (52%)
Calpain_III 579..716 CDD:460050 56/139 (40%)
EFh_PEF_CalpA_B 758..925 CDD:320071
EF-hand motif 758..786 CDD:320071
EF-hand motif 799..829 CDD:320071
EF-hand motif 830..860 CDD:320071
EF-hand motif 866..894 CDD:320071
EF-hand motif 895..925 CDD:320071
clp-6NP_500081.2 Peptidase_C2 158..450 CDD:459889 155/296 (52%)
Calpain_III 473..624 CDD:238132 61/156 (39%)
Blue background indicates that the domain is not in the aligned region.

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