DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and clp-6

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_500081.2 Gene:clp-6 / 190738 WormBaseID:WBGene00000546 Length:627 Species:Caenorhabditis elegans


Alignment Length:490 Identity:226/490 - (46%)
Similarity:306/490 - (62%) Gaps:26/490 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 FQSLRDSCLANGTMFEDPDFPATNASLMYSRRPDRYYEWLRPGDIADDPQFFVEGYSRFDVQQGE 310
            |...|..||....:||||.|||.|:|:.|.:.|..:..||||..|..:|:..|.|.|||||:||.
 Worm   144 FYEERQKCLDENRLFEDPQFPANNSSIYYKKPPKSHIVWLRPAKIFANPRLIVNGKSRFDVRQGS 208

  Fly   311 LGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVIDDRLPTYNGELI 375
            ||:||.|||||.|.|...||:||:||||.|.|||||||||:||:||:||:|||||||||.||:||
 Worm   209 LGNCWFLAAAATLAQRDELFYRVVPPDQSFTENYAGIFHFQFWRYGEWVDVVIDDRLPTVNGKLI 273

  Fly   376 YMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEAPPN-LFSIMMK 439
            ||.|.:.:|.|..|||||||||:|:||.|.||||.||:||||||:||:||:...... :.:::||
 Worm   274 YMSSQDGDECWGPLLEKAYAKLYGTYEHLDGGTTTEALEDFTGGLTEFYDLTSTDKTMILAMIMK 338

  Fly   440 AAERGSMMGCSLEPDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNRQGKLPMIRMRNPWGNDA 504
            ..:.||:..||::|||...||:...||:||||||:|.|..::..    :.|:.::|:||||| |.
 Worm   339 GMQMGSLFACSIDPDPREKEAQLANGLVRGHAYSVTGVHTVETD----KEKVALLRIRNPWG-DT 398

  Fly   505 EWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTE----- 564
            ||:|.|||.|..|..:.:..:|::......||||||...||:..|..::.||||.|.:.|     
 Worm   399 EWNGDWSDKSSLWEQVDQEQREKMEFRIKEDGEFWMCLDDFMAQFANLDCCNLSADVMHEITEMT 463

  Fly   565 --DQQHSSRRKWEMSMFEGEWTSGV-TAGGCRNFLETFWHNPQY--IISLEDPDDEDDDGKCTAI 624
              :......::|.....:|||.|.. |||||.|...||..||||  ......|...|   |||.|
 Worm   464 EIEVMEKQSKQWIQKSADGEWCSRKGTAGGCSNNENTFCTNPQYETYFRATSPSSND---KCTVI 525

  Fly   625 VALMQKNRRSKRNVGIDCLTIGFAIYHLTDRDMQVKPQGLNFFKYRASVARSPHFINTREVCARF 689
            .|:.||.||::.:.|:|.|.||.::|.::..:.:|..:   ..|..|.:|.:..|::.||...||
 Worm   526 AAVFQKYRRNQLHRGLDMLQIGLSVYKMSGPNEKVTAE---MMKTHAPIASTKLFVDYREAVVRF 587

  Fly   690 KLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNNME 724
            .:|||:|:|||.||:||.:.||::|.||    |:|
 Worm   588 TVPPGYYVIVPCTFEPNHDAEFLLRTFS----NVE 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 155/296 (52%)
Calpain_III 574..721 CDD:279416 59/149 (40%)
EF-hand_7 759..825 CDD:290234
EFh 761..826 CDD:298682
FRQ1 827..>908 CDD:227455
clp-6NP_500081.2 Peptidase_C2 158..450 CDD:366222 155/296 (52%)
Calpain_III 473..624 CDD:238132 61/156 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158985
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 1 1.000 - - mtm4791
orthoMCL 1 0.900 - - OOG6_100404
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.710

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