DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and clp-10

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001367887.1 Gene:clp-10 / 189220 WormBaseID:WBGene00021041 Length:476 Species:Caenorhabditis elegans


Alignment Length:520 Identity:137/520 - (26%)
Similarity:191/520 - (36%) Gaps:130/520 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 VIPPDQDFQENYA--GIFHFKFWQYGKWVEVVIDDRLPTY-NGELIYMHSTEKNEFWSALLEKAY 394
            :||..|     |:  |::..|....|||..:::||..|.| |...|.:....:|:.|..|:|||.
 Worm    14 IIPKKQ-----YSKHGVYQVKVCVEGKWEVIIVDDFFPCYRNTNSIAIAVGRRNQLWVPLIEKAM 73

  Fly   395 AKLHGSYEALKGGTTCEAMEDFTGGVTEWY------DIKEAPPNLFSIMMKAAERGSMMGCSLEP 453
            ||:.|||..|.|.:....:...||.....|      .|.|.....::.::.:.|.|.:..|...|
 Worm    74 AKVLGSYSKLHGASLARGLSMLTGASCVRYKCPQTLKIDEEVDTFWAQLVSSQESGFLTCCHCGP 138

  Fly   454 -DPHVLEAE-TPQGLIRGHAYSITKVCLMDISTPNRQGKLPMIRMRNPWGNDAEWSGPWSDSSPE 516
             :....||| ...||:..|||||..|.       :.||. .::|:|||||... |:|.|||...|
 Worm   139 FESEEAEAEFKALGLVTSHAYSILDVV-------HEQGH-RLLRIRNPWGQFV-WNGKWSDGWLE 194

  Fly   517 WRFIPEHTKEE-IGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQHSSRRKWEMSMFE 580
            |   |...|.. :....|..|.|||..|||:..|..|.:|.|..|                    
 Worm   195 W---PIDMKRALLDKRSDETGAFWMDLQDFVKRFASVTVCKLRMD-------------------- 236

  Fly   581 GEWTSGVTAGGCRNFLETFWHNP---QYIISLEDPDDEDDDGKCTAIVALMQKNRRSKRNVGIDC 642
              |:.      .|...|...|..   |.:|:         :..|...|...||...||.    |.
 Worm   237 --WSE------LRATQEVGRHADSALQIVIT---------EQLCEVSVTAFQKGSFSKE----DN 280

  Fly   643 LTIGFAIYHLTDRDMQVKPQGLNFFKYRASVARSPHFINTREVCARFKLPPGHYLIV---PSTFD 704
            ||......|....|.::.    ...|....:|.: ||     ....|.||.|.|.:|   |.:..
 Worm   281 LTDLMVCVHKISEDGRIG----ELIKMSYEIADN-HF-----TIDEFFLPRGVYQVVCHSPHSLV 335

  Fly   705 PNEEGEFIIRVFSETRNNMEENDDEVGFGETDDRIAPSLPPPTPK-----------EEDDPQRIA 758
            .|..|  ::.:...||..:        |||:        .|.:|.           ||...|.|.
 Worm   336 TNTTG--VVNIIVHTRFPI--------FGES--------VPMSPLTRLESLHRVIIEEGVVQNIK 382

  Fly   759 L-----RRLFDSVAGSDEEVD-WQELKRI---LDHSMRDVMVGSDG--FSKDAV----RSMVAML 808
            |     |.|.....||...|| :.|.|.:   :|:|....:..|.|  ...|.|    |.::|:|
 Worm   383 LDGVVIRTLNQKFRGSITMVDNYMEQKYLHVKVDNSKSMNVQSSRGSLLIADVVPPRSRQVIAVL 447

  Fly   809  808
             Worm   448  447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 75/234 (32%)
Calpain_III 574..721 CDD:279416 31/152 (20%)
EF-hand_7 759..825 CDD:290234 18/65 (28%)
EFh 761..826 CDD:298682 16/58 (28%)
FRQ1 827..>908 CDD:227455
clp-10NP_001367887.1 CysPc <1..241 CDD:412132 79/271 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.