DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and clp-8

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_493327.2 Gene:clp-8 / 185746 WormBaseID:WBGene00009695 Length:646 Species:Caenorhabditis elegans


Alignment Length:383 Identity:100/383 - (26%)
Similarity:163/383 - (42%) Gaps:67/383 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 QEEEPSVGVAEL--SFTSVKVPENQN-MFWMGRKATSARQNSVSKGDFQSLRDSCLANGTMFEDP 263
            ||||    :.||  .:...|...|.| ..::|........|.    .|:|:.:.|..:.:.|.|.
 Worm     5 QEEE----LLELIEKYNEDKYCTNMNWTIFLGDHENEKEANE----KFKSILEDCQRSKSAFIDK 61

  Fly   264 DFPATNASLMYSRRPDRYY-------EWLRP----------GDIAD-----DPQFFVEGYSRFDV 306
            :||....|.|......:.|       .||.|          .|::.     :|..|    :.::|
 Worm    62 EFPHEPKSYMTFDEQSKVYGKYESWKTWLFPKIWRRITPPSTDVSSSLSVYNPLTF----TAYEV 122

  Fly   307 QQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVIDDRLPTYN 371
            .|.::|||.|:||.:.::....:...:.   ...|.:..|::..|.:..|:|..::|||..| |.
 Worm   123 FQRKVGDCGLVAALSAISTKPEVIMNIF---DSLQLSKYGVYKVKLFVDGQWKTIIIDDYFP-YT 183

  Fly   372 GELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEAPPNL--- 433
            .:.|.:.:|...:.|:||:|||..|..|:|:.:.|..:..|....||.......:.:...||   
 Worm   184 TDGIRIGATSGYQIWAALIEKALVKECGNYKGIHGFQSLSAFSALTGSPVLLIPVAKMFNNLRKY 248

  Fly   434 FSIMMKAAERGSMMGCSLEPDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNRQGKLPMIRMRN 498
            :..:|:.......|.|.      .|..|. .|::..|||:|     |||  ..|.|. .::.:||
 Worm   249 WKTLMEFRNNQYPMACG------TLNREV-NGILPQHAYTI-----MDI--VERDGH-KLLLLRN 298

  Fly   499 PWGNDAEWSGPWSDSSPEWRFIPEHTKEEI-GLNFDRDGEFWMSFQDFLNHFDRVEIC 555
            |.|... |:..|   |.||.:.||:.|:.: |:   ..|.||:|:.||||.|..:.:|
 Worm   299 PSGGSV-WTRNW---SKEWEWWPENMKDLLEGM---IRGSFWISWDDFLNVFCSIYVC 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403 8/24 (33%)
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 86/322 (27%)
Calpain_III 574..721 CDD:279416
EF-hand_7 759..825 CDD:290234
EFh 761..826 CDD:298682
FRQ1 827..>908 CDD:227455
clp-8NP_493327.2 CysPc 47..350 CDD:238004 87/333 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158991
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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