DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and Capn5

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:XP_063133414.1 Gene:Capn5 / 171495 RGDID:620084 Length:750 Species:Rattus norvegicus


Alignment Length:644 Identity:232/644 - (36%)
Similarity:337/644 - (52%) Gaps:115/644 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 QHNIGFPALP------YPT----APPPESAPTQEEEPSVGVAELSFTSVKVPENQNMFWMGRKAT 234
            |...|.|:|.      .||    .|.....|     |.:|.....|:..|..|:||         
  Rat    72 QQTAGRPSLSLTSCLCIPTIHRLCPTLTQGP-----PLIGDVVTMFSCTKAYEDQN--------- 122

  Fly   235 SARQNSVSKGDFQSLRDSCLANGTMFEDPDFPATNASLMYSRRPDRYYEWLRPGDIADDPQFFVE 299
                       :.:|:.:||....:||||.||||:.||.|...|.....|.||.||.|||:.||:
  Rat   123 -----------YSALKRACLRRKVLFEDPHFPATDDSLYYKGTPGPTVRWKRPKDICDDPRLFVD 176

  Fly   300 GYSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIP--PDQDFQ----ENYAGIFHFKFWQYGKW 358
            |.|..|:.||::|:||.:||.::|....:|:.:|||  .:|::.    ::|||||||.||::|:|
  Rat   177 GISSHDLHQGQVGNCWFVAACSSLASRESLWQKVIPDWKEQEWNPEKPDSYAGIFHFNFWRFGEW 241

  Fly   359 VEVVIDDRLPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEW 423
            |:||:||||||.|.:|||.||..|||||.||:|||||||.|.|:||.||.|.:|:.||||||:|.
  Rat   242 VDVVVDDRLPTVNNQLIYCHSNSKNEFWCALVEKAYAKLAGCYQALDGGNTADALVDFTGGVSEP 306

  Fly   424 YDIKEAP--------PNLFSIMMKAAERGSMMGCSLEPDPHV-LEAETPQGLIRGHAYSITKVCL 479
            .|:.|..        ..||..::|...||.::..|::..... :|.....||::||||::|.|..
  Rat   307 IDLTEGDLATDEAKRSQLFERVLKVHSRGGLISASIKAMTAADMETRLACGLVKGHAYAVTDVRK 371

  Fly   480 MDISTPNRQG----------KLPMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDR 534
            :      |.|          ||.|||:||||| :.||:|||||:|.||:.:.:..:|::|:....
  Rat   372 V------RLGHGLLAFFKSEKLDMIRLRNPWG-EREWTGPWSDTSEEWQKVSKSEREKMGVTVQD 429

  Fly   535 DGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQHSSRRKWEMSMFEGEWT-----SGVTAGGCRN 594
            ||||||:|:|...:|..:..|.|...|..     |..:.||.:...|.||     ....:|||.|
  Rat   430 DGEFWMTFEDMCRYFTDIIKCRLINTSYL-----SIHKTWEEARLRGAWTRHEDPQQNRSGGCIN 489

  Fly   595 FLETFWHNPQYIISLEDPDDEDDDGKCTAIVALMQKNRRSKRNVGI-DCLTIGFAIYHLTDRDMQ 658
            ..:||:.|||||..::.|:||       .::.:.|:.:||.|..|. :.|.|||.||.: :.:.|
  Rat   490 HKDTFFQNPQYIFEVKKPEDE-------VLICIQQRPKRSTRREGKGENLAIGFDIYKV-EENRQ 546

  Fly   659 VKPQGLNFFKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNNM 723
            .:...|   :::|:   |..:||:|.|..|.:||.|.|:|:|:||:|...|||::|||::..:|.
  Rat   547 YRMHSL---QHKAA---SSIYINSRSVFLRTELPEGRYVIIPTTFEPGHTGEFLLRVFTDVPSNC 605

  Fly   724 EE-NDDEVGFGETDDRIAPSLPPPT--------PKEEDDPQRIALRRLFDSVAGSDEEV 773
            .| ..||              ||.|        |::......:....|.||..|::..|
  Rat   606 RELRLDE--------------PPRTCWSSLCGYPQQVTQVHVLGAAGLKDSSTGANSYV 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021 8/36 (22%)
Peptidase_C2 260..556 CDD:459889 143/320 (45%)
Calpain_III 579..716 CDD:460050 50/142 (35%)
EFh_PEF_CalpA_B 758..925 CDD:320071 5/16 (31%)
EF-hand motif 758..786 CDD:320071 5/16 (31%)
EF-hand motif 799..829 CDD:320071
EF-hand motif 830..860 CDD:320071
EF-hand motif 866..894 CDD:320071
EF-hand motif 895..925 CDD:320071
Capn5XP_063133414.1 None
Blue background indicates that the domain is not in the aligned region.

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