DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and Capn5

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:XP_006507338.1 Gene:Capn5 / 12337 MGIID:1100859 Length:653 Species:Mus musculus


Alignment Length:608 Identity:225/608 - (37%)
Similarity:332/608 - (54%) Gaps:100/608 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 PSVGVAELSFTSVKVPENQNMFWMGRKATSARQNSVSKGDFQSLRDSCLANGTMFEDPDFPATNA 270
            |.:|.....|:..|..|:||                    :.:|:.:||....:||||.||||:.
Mouse     6 PLLGDVVTMFSCAKAYEDQN--------------------YSALKRACLRKKVLFEDPLFPATDD 50

  Fly   271 SLMYSRRPDRYYEWLRPGDIADDPQFFVEGYSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIP 335
            ||.|...|.....|.||.||.|||:.||:|.|..|:.||::|:||.:||.::|....:|:.:|||
Mouse    51 SLYYKGTPGPTVRWKRPKDICDDPRLFVDGISSHDLHQGQVGNCWFVAACSSLASRESLWQKVIP 115

  Fly   336 --PDQDFQ----ENYAGIFHFKFWQYGKWVEVVIDDRLPTYNGELIYMHSTEKNEFWSALLEKAY 394
              .:|::.    ::|||||||.||::|:||:|::||||||.|.:|||.||..|||||.||:||||
Mouse   116 DWKEQEWNPEKPDSYAGIFHFNFWRFGEWVDVIVDDRLPTVNNQLIYCHSNSKNEFWCALVEKAY 180

  Fly   395 AKLHGSYEALKGGTTCEAMEDFTGGVTEWYDI-------KEAPPN-LFSIMMKAAERGSMMGCSL 451
            |||.|.|:||.||.|.:|:.||||||:|..|:       .||..| ||..::|...||.::..|:
Mouse   181 AKLAGCYQALDGGNTADALVDFTGGVSEPIDLTEGDLATDEAKRNQLFERVLKVHSRGGLISASI 245

  Fly   452 EPDPHV-LEAETPQGLIRGHAYSITKVCLMDISTPNRQG----------KLPMIRMRNPWGNDAE 505
            :..... :||....||::||||::|.|..:      |.|          ||.|||:||||| :.|
Mouse   246 KAVTAADMEARLACGLVKGHAYAVTDVRKV------RLGHGLLAFFKSEKLDMIRLRNPWG-ERE 303

  Fly   506 WSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQHSS 570
            |:|||||:|.||:.:.:..:|::|:....||||||:|:|...:|..:..|.|...|..     |.
Mouse   304 WTGPWSDTSEEWQKVSKSEREKMGVTVQDDGEFWMTFEDMCRYFTDIIKCRLINTSYL-----SI 363

  Fly   571 RRKWEMSMFEGEWT-----SGVTAGGCRNFLETFWHNPQYIISLEDPDDEDDDGKCTAIVALMQK 630
            .:.||.:...|.||     ....:|||.|..:||:.||||:..::.|:||       .::::.|:
Mouse   364 HKTWEEARLHGAWTRHEDPQQNRSGGCINHKDTFFQNPQYVFEVKKPEDE-------VLISIQQR 421

  Fly   631 NRRSKRNVGI-DCLTIGFAIYHLTDRDMQVKPQGLNFFKYRASVARSPHFINTREVCARFKLPPG 694
            .:||.|..|. :.|.|||.||.: :.:.|.:...|   :::|:   |..:||:|.|..|.:||.|
Mouse   422 PKRSTRREGKGENLAIGFDIYKV-EENRQYRMHSL---QHKAA---SSIYINSRSVFLRTELPEG 479

  Fly   695 HYLIVPSTFDPNEEGEFIIRVFSETRNNMEE-NDDEVGFGETDDRIAPSLPPPT--------PKE 750
            .|:|:|:||:|...|||::|||::..:|..| ..||              ||.|        |::
Mouse   480 RYVIIPTTFEPGHTGEFLLRVFTDVPSNCRELRLDE--------------PPRTCWSSLCGYPQQ 530

  Fly   751 EDDPQRIALRRLFDSVAGSDEEV 773
            ......:....|.||..|::..|
Mouse   531 VAQVHVLGAAGLKDSPTGANSYV 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403 5/18 (28%)
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 145/320 (45%)
Calpain_III 574..721 CDD:279416 53/152 (35%)
EF-hand_7 759..825 CDD:290234 5/15 (33%)
EFh 761..826 CDD:298682 5/13 (38%)
FRQ1 827..>908 CDD:227455
Capn5XP_006507338.1 Peptidase_C2 40..354 CDD:366222 145/320 (45%)
Calpain_III 365..511 CDD:238132 54/159 (34%)
C2_Calpain 528..651 CDD:176011 6/26 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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