DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and Capn2

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_033924.2 Gene:Capn2 / 12334 MGIID:88264 Length:700 Species:Mus musculus


Alignment Length:703 Identity:325/703 - (46%)
Similarity:450/703 - (64%) Gaps:58/703 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 DFQSLRDSCLANGTMFEDPDFPATNASLMYSR-----RPDRYYEWLRPGDIADDPQFFVEGYSRF 304
            |:::||:.||..|.:|:||.|||..:||.|..     ...|..||.||.:|..||||.:.|.:|.
Mouse    31 DYETLRNECLEAGALFQDPSFPALPSSLGYKELGPYSSKTRGIEWKRPTEICADPQFIIGGATRT 95

  Fly   305 DVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVIDDRLPT 369
            |:.||.|||||||||.|:||.:..:..||:||||.|||||||||||:|||||:|||||:||||||
Mouse    96 DICQGALGDCWLLAAIASLTLNEEILARVVPPDQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPT 160

  Fly   370 YNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEAPPNLF 434
            .:|||:::||.|.:|||||||||||||::|.||||.||.|.|..||||||:.|||::::.|||||
Mouse   161 KDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELRKPPPNLF 225

  Fly   435 SIMMKAAERGSMMGCSLE----PDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNRQGKL-PMI 494
            .|:.||.|:||::|||::    .|.   ||.|.|.|::|||||:|....::.|     |.| .:|
Mouse   226 KIIQKALEKGSLLGCSIDITSAADS---EAVTYQKLVKGHAYSVTGAEEVESS-----GSLQKLI 282

  Fly   495 RMRNPWGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLSP 559
            |:||||| ..||:|.|:|:.|.|..:....:..: .....||||||||.|||.|:.|:|||||:|
Mouse   283 RIRNPWG-QVEWTGKWNDNCPSWNTVDPEVRANL-TERQEDGEFWMSFSDFLRHYSRLEICNLTP 345

  Fly   560 DSLTEDQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFWHNPQYIISLEDPDDEDDDGK--CT 622
            |:||.|    |.:||:::..:|.|..|.|||||||:..|||.||||:|.||:.|::::||:  ||
Mouse   346 DTLTCD----SYKKWKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLEEEDEDEEDGERGCT 406

  Fly   623 AIVALMQKNRRSKRNVGIDCLTIGFAIYHLTDRDMQVKPQ-----GLNFFKYRASVARSPHFINT 682
            .:|.|:||:||.:|.:|.|..||||.||.:.:   ::..|     |.|||....:..||..|||.
Mouse   407 FLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPE---ELTGQTNIHLGKNFFLTTRARERSDTFINL 468

  Fly   683 REVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNNMEENDDEV--GFGETDDRIAPSLPP 745
            |||..|||||||.|::|||||:|:::|:|.||||||.:.:.:..|||:  ...|.|         
Mouse   469 REVLNRFKLPPGEYVLVPSTFEPHKDGDFCIRVFSEKKADYQAVDDEIEANIEEID--------- 524

  Fly   746 PTPKEEDDPQRIALRRLFDSVAGSDEEVDWQELKRILDHSMRDVM-----VGSDGFSKDAVRSMV 805
              ..|||...  ..||||..:||.|.|:...||:.||    |.|:     :.|||||.:..:.||
Mouse   525 --ANEEDIDD--GFRRLFVQLAGEDAEISAFELQTIL----RRVLAKRQDIKSDGFSIETCKIMV 581

  Fly   806 AMLDKDRSGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGALNSAGYHLNNRLLNAL 870
            .|||:|.||:||.:||..|.|.|.|::.:::..|..|:|:::.:.:|.||..||:.|..:|...:
Mouse   582 DMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVI 646

  Fly   871 AHRYGSREGQIPFDDFLMCAIKVRTFIEMFRERDTDNSDTAFFNLDDWLERTI 923
            ..|:...|..|.||:|:.|.:::.|..::|::.|.:|:.|...||..||..::
Mouse   647 VARFADDELIIDFDNFVRCLVRLETLFKIFKQLDPENTGTIQLNLASWLSFSV 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889 164/305 (54%)
Calpain_III 579..716 CDD:460050 71/143 (50%)
EFh_PEF_CalpA_B 758..925 CDD:320071 61/171 (36%)
EF-hand motif 758..786 CDD:320071 12/27 (44%)
EF-hand motif 799..829 CDD:320071 14/29 (48%)
EF-hand motif 830..860 CDD:320071 8/29 (28%)
EF-hand motif 866..894 CDD:320071 8/27 (30%)
EF-hand motif 895..925 CDD:320071 9/29 (31%)
Capn2NP_033924.2 Peptidase_C2 46..342 CDD:459889 164/305 (54%)
Domain III 345..514 83/175 (47%)
Calpain_III 354..512 CDD:238132 77/160 (48%)
Linker 515..529 4/24 (17%)
Domain IV 530..700 61/176 (35%)
EFh_PEF_CAPN2 533..700 CDD:320074 61/171 (36%)
EF-hand motif 533..561 CDD:320074 13/31 (42%)
EF-hand motif 576..605 CDD:320074 14/28 (50%)
EF-hand motif 606..636 CDD:320074 8/29 (28%)
EF-hand motif 642..670 CDD:320074 8/27 (30%)
EF-hand motif 672..700 CDD:320074 8/28 (29%)
Blue background indicates that the domain is not in the aligned region.

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