DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and CAPN10

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_075571.2 Gene:CAPN10 / 11132 HGNCID:1477 Length:672 Species:Homo sapiens


Alignment Length:544 Identity:157/544 - (28%)
Similarity:242/544 - (44%) Gaps:110/544 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 GRKATSARQNSVSKGDFQSLRDSCLANGTMFEDPDFPATNASL-------MYSRRPDRYYEWLRP 287
            ||.||.||:                    :|.|..|||.::||       :...|.|  ..|.||
Human     4 GRGATPARE--------------------LFRDAAFPAADSSLFCDLSTPLAQFRED--ITWRRP 46

  Fly   288 GDIADDPQFFVEGYSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQD--FQENYAGIFHF 350
            .:|...|:.|.:......|:||.|||||.|.|.|.|.:...|..:||||.|.  ..:.|.|.|..
Human    47 QEICATPRLFPDDPREGQVKQGLLGDCWFLCACAALQKSRHLLDQVIPPGQPSWADQEYRGSFTC 111

  Fly   351 KFWQYGKWVEVVIDDRLPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMED 415
            :.||:|:||||..|||||...|.|.:.....::.||..||||.|||:|||||.|..|...:|:.|
Human   112 RIWQFGRWVEVTTDDRLPCLAGRLCFSRCQREDVFWLPLLEKVYAKVHGSYEHLWAGQVADALVD 176

  Fly   416 FTGGVTEWYDIK--------EAPPNLFS-----IMMKAAERGSMMGCSLEPDPHVLEAETPQGLI 467
            .|||:.|.:::|        :..|..:.     .::...::..:..|.|.|.....|      |.
Human   177 LTGGLAERWNLKGVAGSGGQQDRPGRWEHRTCRQLLHLKDQCLISCCVLSPRAGARE------LG 235

  Fly   468 RGHAYSITKV---------CLMDISTPNRQGKLPMIRMRNPWGNDAEWSGPWSDSSPEWRFIPEH 523
            ..||:.::.:         |::            ::|::||||... |.|.|.:....|..:...
Human   236 EFHAFIVSDLRELQGQAGQCIL------------LLRIQNPWGRRC-WQGLWREGGEGWSQVDAA 287

  Fly   524 TKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSGVT 588
            ...|: |:..::||||:..::||..||.:.:.....::......::.|.........|.|..|.:
Human   288 VASEL-LSQLQEGEFWVEEEEFLREFDELTVGYPVTEAGHLQSLYTERLLCHTRALPGAWVKGQS 351

  Fly   589 AGGCRNFLETFWHNPQYIISLEDPDDEDDDGKCTAIVALMQKNR--------RSKRNVGIDCLT- 644
            |||||| ...|..||::.:.:.:|.:        ..:|::|::|        |::..|| |..| 
Human   352 AGGCRN-NSGFPSNPKFWLRVSEPSE--------VYIAVLQRSRLHAADWAGRARALVG-DSHTS 406

  Fly   645 -------------IGFAIYHLTDRDMQVKPQGLNFFKYRASVARSPHFINTREVCARFKLPPGHY 696
                         :|..::.:..|.:.: |:.|:.    ..||.:......|||..|.:|.||:|
Human   407 WSPASIPGKHYQAVGLHLWKVEKRRVNL-PRVLSM----PPVAGTACHAYDREVHLRCELSPGYY 466

  Fly   697 LIVPSTFDPNEEGEFIIRVFSETR 720
            |.|||||..:..|||::||||..|
Human   467 LAVPSTFLKDAPGEFLLRVFSTGR 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 101/326 (31%)
Calpain_III 574..721 CDD:279416 49/169 (29%)
EF-hand_7 759..825 CDD:290234
EFh 761..826 CDD:298682
FRQ1 827..>908 CDD:227455
CAPN10NP_075571.2 CysPc 2..319 CDD:238004 107/356 (30%)
Domain III 1 322..494 50/184 (27%)
Calpain_III 335..496 CDD:238132 49/171 (29%)
Calpain_III 512..653 CDD:238132
Domain III 2 513..654
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.920

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