DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and capn8.3

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:XP_031758475.1 Gene:capn8.3 / 100498169 XenbaseID:XB-GENE-18006552 Length:700 Species:Xenopus tropicalis


Alignment Length:695 Identity:281/695 - (40%)
Similarity:410/695 - (58%) Gaps:50/695 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 DFQSLRDSCLANGTMFEDPDFPATNASL-MYSRRPD----RYYEWLRPGDIADDPQFFVEGYSRF 304
            |:..|:..|||:.::|||..|||:.||| :....||    :...||||..|...|:|.:.|.:|.
 Frog    31 DYGQLKAQCLASNSLFEDEPFPASQASLGVKELGPDSDKTKGIVWLRPMQIHPKPEFIISGATRS 95

  Fly   305 DVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVIDDRLPT 369
            |::||.|||||.|::.|:||.:.....:|:|.||.||.||||||||||||||:||:||:||||||
 Frog    96 DIRQGSLGDCWFLSSIASLTLNEEYLSQVVPGDQSFQTNYAGIFHFKFWQYGEWVDVVVDDRLPT 160

  Fly   370 YNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEAPPNLF 434
            ..|:|:::.|.|.|||||||||||||||:||||||.||:..:|:||||||:.|.|.:::.|.:||
 Frog   161 KKGKLVFVKSAEGNEFWSALLEKAYAKLNGSYEALIGGSPVDALEDFTGGIAELYYLEKPPADLF 225

  Fly   435 SIMMKAAERGSMMGCSLEPDPHVLEAETPQGLIRGHAYSITKVCLMDISTPNRQGKLPMIRMRNP 499
            ..:.|.....|::.||.:.|...:|......:::.|||:||:.  .::|  .|..|:.:||:|||
 Frog   226 QRVQKVLRANSLLTCSSKSDSGKVETVAKNNVVKNHAYTITRA--EEVS--YRGEKVQLIRLRNP 286

  Fly   500 WGNDAEWSGPWSDSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTE 564
            ||. .||:|.|||::|||..|...|:..:....| |||.||.|.||::.|.|::|||||.|.:..
 Frog   287 WGK-TEWNGAWSDNAPEWDDIDSETRAALNTQGD-DGEVWMPFSDFISEFYRLDICNLSLDCVCS 349

  Fly   565 DQQHSSRRKWEMSMFEGEWTSGVTAGGCRNFLETFWHNPQYIISLEDPDDEDDDGK---CTAIVA 626
            .::    |:|.::.|.|.|.||.|||||:.:.:|||.|||:.|.||:||||...||   ||.|||
 Frog   350 KEE----RRWCLTQFYGSWKSGCTAGGCKKYPDTFWINPQFRIKLEEPDDERGAGKAQSCTVIVA 410

  Fly   627 LMQKNRRSKRNVGIDCLTIGFAIYHLTDRDMQVKPQ---GLNFFKYRASVARSPHFINTREVCAR 688
            |:|||||..:..|.:...:|:.:|.: .:::|..|.   |.:||.....||.:..:...||.|.|
 Frog   411 LIQKNRRKMKPTGGEEFAVGYYLYPI-PKELQGSPDVPLGKDFFLKTKYVAWTDVYKKHRETCCR 474

  Fly   689 FKLPPGHYLIVPSTFDPNEEGEFIIRVFSETRNNMEENDD---------EVGFGETDDRIAPSLP 744
            .|||.|.|:::|.|:.|.:|.:|.:|||||.:..:.|..|         :|...:.:..|...| 
 Frog   475 HKLPVGEYVLLPHTYYPCQEADFCLRVFSEKKVGVWELGDVANADLYQLDVSDIQVESEIGDIL- 538

  Fly   745 PPTPKEEDDPQRIALRRLFDSVAGSDEEVDWQELKRILDHSMRDVMVGSDGFSKDAVRSMVAMLD 809
                 .|.:.|::.:         |.||:. ..|.|||. ..:|:.  |||||....:.|:.:.|
 Frog   539 -----TELEQQKMEM---------SAEELR-INLSRILS-KRKDIK--SDGFSLTTCKEMINLFD 585

  Fly   810 KDRSGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRY 874
            .|.:|:|.::||..|...:.|:..:||..|..|:.||:...:|.||..||::|||::..|:..||
 Frog   586 TDLTGKLSYKEFRPLWIKLVKYTKIFKSADNDRSESIEAHEMRNALQQAGFNLNNKIQEAIVQRY 650

  Fly   875 GSREGQIPFDDFLMCAIKVRTFIEMFRERDTDNSDTAFFNLDDWL 919
            .:....|.||.|:.|.|::.|..:||....|:.:.....:|.:||
 Frog   651 ITNGLSISFDSFIACLIRLETLFKMFELLKTNENGALSLSLSEWL 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 145/300 (48%)
Calpain_III 574..721 CDD:279416 66/152 (43%)
EF-hand_7 759..825 CDD:290234 20/65 (31%)
EFh 761..826 CDD:298682 21/64 (33%)
FRQ1 827..>908 CDD:227455 28/80 (35%)
capn8.3XP_031758475.1 Peptidase_C2 46..341 CDD:395523 145/300 (48%)
Calpain_III 362..502 CDD:395848 60/140 (43%)
EFh_PEF 533..700 CDD:355382 56/182 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6159
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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