DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and capn10l

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:XP_031758129.1 Gene:capn10l / 100497805 XenbaseID:XB-GENE-5889689 Length:708 Species:Xenopus tropicalis


Alignment Length:748 Identity:238/748 - (31%)
Similarity:363/748 - (48%) Gaps:105/748 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 MGRKATSARQNSVSKG-------DFQSLRDSCLANGTMFEDPDFPATNASLMYSRRPDRY----Y 282
            |.|.|...:.:..|:.       ||.:|||..|..|.:|.|.:||| :..::.....|.:    .
 Frog     5 MDRNANQLKLSGGSESPTMFKNQDFHALRDLHLRKGVLFNDEEFPA-DMRVIGPHLIDEFKIHNM 68

  Fly   283 EWLRPGDIADDPQFFVEGYSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIPPDQDFQENYAGI 347
            ||.||.:...:|...|:|.|.||:.|.::||||:|:...::||..||...:||.||.|..|||||
 Frog    69 EWRRPPEFCKNPHLIVDGASYFDIVQSKIGDCWVLSTIGSVTQKQTLLRNIIPADQGFTRNYAGI 133

  Fly   348 FHFKFWQYGKWVEVVIDDRLPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGTTCEA 412
            |||:||..||||:||||||||..||:...:.::...|:|..|||||||||.|||:.|..|...||
 Frog   134 FHFRFWYSGKWVDVVIDDRLPFLNGDFFSVRASCAKEYWPCLLEKAYAKLLGSYQNLHWGDPAEA 198

  Fly   413 MEDFTGGVTEWYDIKEAP---PNLFSIMMKAAERGSMMGCSLE---------------------- 452
            :.:|||.:|....:|...   .:::.::.|:::: :::.|..|                      
 Frog   199 LVNFTGALTLTLKLKGGDLHHSDIWEMVHKSSQK-ALITCISEKAEVMTHNRRYSVPSAMEGRDE 262

  Fly   453 ---PDP---HVLEAETPQGLIRGHAYSITKVCLMDISTPNRQGKLPMIRMRNPWGNDAEWSGPWS 511
               .||   ::.......||:..|||::|     |.:...|:|.:.:||:.||||. .||.|.||
 Frog   263 RRRSDPANKYIENIHVDNGLVDRHAYTVT-----DTAQVYREGCVNLIRLWNPWGR-GEWIGRWS 321

  Fly   512 DSSPEWRFI-PEHTKEEIGLNFDR-DGEFWMSFQDFLNHFDRVEICNLSPDSLT--EDQQHSSRR 572
            |:...|..| ||..|:   ||..| |||||||::.|:..|.||.||:.:.|.|.  .||     |
 Frog   322 DNCSWWNDIDPEDRKK---LNTKREDGEFWMSWETFVQQFSRVIICSPTLDFLNWGRDQ-----R 378

  Fly   573 KWEMSMFEGEWTSGVTAGGCRNFL--ETFWHNPQYIISLEDPDDEDDDGKCTAIVALMQKNRRSK 635
            .|..:.:|..|..   |.|..:..  :.|..||||:|.: .|.||...| ...|::||| |.|::
 Frog   379 SWHKTSYENIWPK---ASGLEDSFNKDLFCKNPQYLIRI-SPSDEVQKG-YNVIISLMQ-NHRNR 437

  Fly   636 RNVGIDCLTIGFAIYHLTDR--DMQVKPQGLNFFKYRASVARSPHFINTREVCARFKLPPGHYLI 698
            :..|...|.|||.:..:...  |.|.|..|..|.|   .:....|....|:|....||..|.|:|
 Frog   438 QKFGRGWLPIGFLVSKVDAELPDPQRKMPGSFFLK---DLQSGIHINKQRDVTKGLKLASGRYVI 499

  Fly   699 VPSTFDPNEEGEFIIRVFSETRNNMEENDDEVGFGETDDRIAPSLPPPTPKEEDDPQRIALRRLF 763
            .|...|.::|..|:::||..::....|..|...|.:.:::         .:||          .|
 Frog   500 TPFNADRSQESSFLLQVFLRSQGCTVELGDSQSFLKNEEK---------TQEE----------TF 545

  Fly   764 DSVAGSDEEVDWQELKRILDHSMRDVMV------GSDGFSKDAVRSMVAMLDKDRSGRLGFEEFE 822
            ...|....:::.|:|::.|:    ||:.      |...||.:|.|||:|.:|...:|:|..|.|.
 Frog   546 MKYATQGGKMNSQDLQKFLN----DVISKGFAPHGGIRFSTEASRSMLASMDFTCNGKLELEFFM 606

  Fly   823 ALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGSREGQIPFDDFL 887
            .|...:..::|:|...|..:.|.|....||.|..|||..:::..|..|..|||..|.::.|:|:|
 Frog   607 RLWRYLNHFKAIFTDVDVDQNGFIGLSELRKAAKSAGMAVSSDQLTILLLRYGDYEMKLNFEDYL 671

  Fly   888 MCAIKVRTFIEMFRERDTDNSDTAFFNLDDWLE 920
            .|.:::::..:.|:...:|... .:.....||:
 Frog   672 CCMVRLKSAFKRFQMLTSDGKG-VYLTEGKWLK 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889 124/332 (37%)
Calpain_III 579..716 CDD:460050 43/140 (31%)
EFh_PEF_CalpA_B 758..925 CDD:320071 46/169 (27%)
EF-hand motif 758..786 CDD:320071 5/27 (19%)
EF-hand motif 799..829 CDD:320071 11/29 (38%)
EF-hand motif 830..860 CDD:320071 10/29 (34%)
EF-hand motif 866..894 CDD:320071 10/27 (37%)
EF-hand motif 895..925 CDD:320071 4/26 (15%)
capn10lXP_031758129.1 Peptidase_C2 43..365 CDD:459889 124/332 (37%)
Calpain_III 400..517 CDD:460050 39/122 (32%)
EFh_PEF_CAPN13_14 541..708 CDD:320070 48/178 (27%)
EF-hand motif 541..568 CDD:320070 8/40 (20%)
EF-hand motif 584..613 CDD:320070 11/28 (39%)
EF-hand motif 614..644 CDD:320070 10/29 (34%)
EF-hand motif 650..678 CDD:320070 10/27 (37%)
EF-hand motif 680..708 CDD:320070 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.