DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and LOC100495980

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:XP_017952054.2 Gene:LOC100495980 / 100495980 XenbaseID:XB-GENE-29082919 Length:737 Species:Xenopus tropicalis


Alignment Length:735 Identity:300/735 - (40%)
Similarity:439/735 - (59%) Gaps:55/735 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 PSVGVAELSFTSVKVPENQNMFWMGRKATSARQNSVSK---GDFQSLRDSCLANGTMFEDPDFPA 267
            |..|:      :|::.:.:|        :|||.| ||.   .|:..|...||....:||||.|||
 Frog     2 PPSGI------TVRLQKEEN--------SSARHN-VSPYLGQDYHRLVQECLKQRQLFEDPHFPA 51

  Fly   268 TNASLMYSR-----RPDRYYEWLRPGDIADDPQFFVEGYSRFDVQQGELGDCWLLAAAANLTQDS 327
            .:.||.|:.     ...:..:|.||.:|...|||..|.....||.|||||:||.|||||:|||..
 Frog    52 KSKSLGYNELGPFSENTKGIQWRRPQEICQSPQFICEDMKWTDVCQGELGNCWFLAAAASLTQYP 116

  Fly   328 TLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVIDDRLPTYNGELIYMHSTEKNEFWSALLEK 392
            .|..||:||.|.|:..|||||||:|||||:||:||:|||||...|||:::.|.:|:|||:|||||
 Frog   117 LLKERVVPPQQSFKSGYAGIFHFQFWQYGEWVDVVVDDRLPVKEGELVFVSSAQKSEFWAALLEK 181

  Fly   393 AYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEAPPNLFSIMMKAAERGSMMGCSLEPDPH- 456
            |||||:||||||.||...||..|||||:.|...:||.|||||.::.||.::.|:||..::|... 
 Frog   182 AYAKLNGSYEALNGGFMNEAFVDFTGGLGETVKLKETPPNLFHLLQKAVKKKSLMGAFIQPQSQS 246

  Fly   457 VLEAETPQGLIRGHAYSITKVCLMDISTPNRQGKLPMIRMRNPWGNDAEWSGPWSDSSPEWRFIP 521
            .:|.:||:||:.||||||.....|    .|...|:|::|:|||||. .||:|.|||.|..|..:.
 Frog   247 QIENQTPEGLLTGHAYSIIATWEM----KNNGKKIPLLRLRNPWGR-VEWNGHWSDDSTLWSQVD 306

  Fly   522 EHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTSG 586
            ...::::.:. ..||||||..:|||..||.:|:|||:|:|:|:  :|:  :.|:.:.|.|.|. |
 Frog   307 PEIRKKLQVR-GEDGEFWMQMEDFLRFFDILEVCNLTPESVTD--KHA--QLWKTNTFCGRWL-G 365

  Fly   587 VTAGGCRNFLETFWHNPQYIISLEDPDDEDDDGKCTAIVALMQKNRRSKRNVGIDCLTIGFAIYH 651
            .:|||||.:.:|||.|||::::|.: .||:..|.||.:|:|||||||..|::|.|.|::||.||.
 Frog   366 HSAGGCRTYKDTFWTNPQFLVTLTE-QDEEKHGMCTLLVSLMQKNRRQCRSIGQDFLSVGFEIYQ 429

  Fly   652 LT---DRDMQVKPQGLNFFKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFII 713
            :.   |..| ...:..|.|....||| |..|::.|:|..|::||||.||::||||.|::|.:||:
 Frog   430 VPKEFDNKM-CASERKNLFSSLVSVA-SCSFMDERDVTGRYQLPPGRYLLIPSTFQPHQESDFIM 492

  Fly   714 RVFSETRNNMEENDDEVGFGETDDRIAPSLPPPTPKEEDDPQRIALRRLFDSVAGSDEEVDWQEL 778
            |:|:|.::...|.|.|:   ..:..:..........||...|       |..::|.|:|:..:||
 Frog   493 RIFTEKQHTFIEIDCEI---RANGNVFKENALKDTMEEFSAQ-------FARLSGEDQEISPEEL 547

  Fly   779 KRIL-DHSMRDVMVGSDGFSKDAVRSMVAMLDKDRSGRLGFEEFEALLTDIAKWRAVFKLYDTRR 842
            :||| ..:.::..:.::|||.|..|.:|.|:|.:.:|:|..|||..|.:.|.:|..:|..||..|
 Frog   548 QRILIQITSKNTHLKTNGFSLDICRKLVKMVDLNCNGKLQLEEFRKLWSKIKEWEKIFTNYDKDR 612

  Fly   843 TGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKVRTFIEMFRERDTDN 907
            :|::|...|..||.:||:.|||:|:.:|..:||:...|:.||.||.|...:....|..|..|.:.
 Frog   613 SGTMDVQELCLALEAAGFTLNNQLVESLCQKYGNNVRQVYFDSFLSCLAYLVCVFEQCRIMDKNK 677

  Fly   908 SDTAFFNLDD---WLERTIY 924
            ......:.::   :::.|||
 Frog   678 DGVICISKEEASIYIKGTIY 697

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity