DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and gca

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001119547.1 Gene:gca / 100125139 XenbaseID:XB-GENE-983090 Length:203 Species:Xenopus tropicalis


Alignment Length:177 Identity:61/177 - (34%)
Similarity:98/177 - (55%) Gaps:15/177 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   751 EDDPQRIALRRLFDSVAGSDEEVDWQELKRILDHSMRDVMVGSDG----FSKDAVRSMVAMLDKD 811
            |.||    |...|.:|||.|.|:|.:||:|.|      ...|..|    ||.:..|.::||||:|
 Frog    36 EGDP----LWGYFRAVAGQDGEIDAEELQRCL------TQAGIQGTYTPFSLETCRVLIAMLDRD 90

  Fly   812 RSGRLGFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGS 876
            .:|::||.||:.:...::.|:..|..:|..|:|:::...|..|:.:.||.|:...|:.:..|| |
 Frog    91 FTGKMGFSEFKEVWGALSAWKQNFCTFDQDRSGTVEPHELNQAIFAMGYRLSPPTLSTIVKRY-S 154

  Fly   877 REGQIPFDDFLMCAIKVRTFIEMFRERDTDNSDTAFFNLDDWLERTI 923
            :.|:|.|||::.|.:|:|...::||.||........|..||:|:.|:
 Frog   155 KNGRIYFDDYVACCVKLRALTDVFRRRDGMQQGFVNFIYDDFLQCTM 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889
Calpain_III 579..716 CDD:460050
EFh_PEF_CalpA_B 758..925 CDD:320071 58/170 (34%)
EF-hand motif 758..786 CDD:320071 12/27 (44%)
EF-hand motif 799..829 CDD:320071 11/29 (38%)
EF-hand motif 830..860 CDD:320071 7/29 (24%)
EF-hand motif 866..894 CDD:320071 11/27 (41%)
EF-hand motif 895..925 CDD:320071 9/29 (31%)
gcaNP_001119547.1 EFh_PEF_grancalcin 39..203 CDD:320061 59/174 (34%)
EF-hand motif 39..67 CDD:320061 13/37 (35%)
EF-hand motif 79..108 CDD:320061 11/28 (39%)
EF-hand motif 109..139 CDD:320061 7/29 (24%)
EF-hand motif 145..172 CDD:320061 11/27 (41%)
EF-hand motif 173..203 CDD:320061 9/29 (31%)
Blue background indicates that the domain is not in the aligned region.

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