DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpB and capn3b

DIOPT Version :10

Sequence 1:NP_524016.4 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:NP_001230250.1 Gene:capn3b / 100034405 ZFINID:ZDB-GENE-041001-149 Length:723 Species:Danio rerio


Alignment Length:747 Identity:314/747 - (42%)
Similarity:456/747 - (61%) Gaps:62/747 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 ELSFTSVKVPENQ------------NMFWMGRKATSARQNSVSKG----DFQSLRDSCLANGTMF 260
            :.|.|||::.|..            |::    .|..:|..:|...    |||.|||..:....:|
Zfish     6 KFSETSVQLTEAAPQTVGSGFTAPGNIY----SAILSRNEAVKDARRLKDFQELRDKYVRKKVLF 66

  Fly   261 EDPDFPATNASLMYSRRPDRYYEWLRPGDIADDPQFFVEGYSRFDVQQGELGDCWLLAAAANLTQ 325
            |||.|||.::||.||.:.....||.||.:|..:|||.:.|.:|.|:.||:|||||||||.|.||.
Zfish    67 EDPLFPAQDSSLFYSEKFPLKLEWKRPMEICKNPQFILGGANRTDICQGDLGDCWLLAAIACLTL 131

  Fly   326 DSTLFFRVIPPDQDFQENYAGIFHFKFWQYGKWVEVVIDDRLPTYNGELIYMHSTEKNEFWSALL 390
            :..:..||:|.||.|.|||||||||:||:||:||:||||||||||..:|::..|.:.|||||||:
Zfish   132 NDVILKRVVPHDQSFTENYAGIFHFQFWRYGEWVDVVIDDRLPTYKNKLVFTRSGQNNEFWSALM 196

  Fly   391 EKAYAKLHGSYEALKGGTTCEAMEDFTGGVTEWYDIKEAPPNLFSIMMKAAERGSMMGCSLEP-D 454
            |||||||||||||||||.:.||||||||||||:|:|.|||..|::||.||.:|||:|||:::. .
Zfish   197 EKAYAKLHGSYEALKGGNSLEAMEDFTGGVTEFYEITEAPKELYNIMRKALKRGSLMGCAIDTLV 261

  Fly   455 PHVLEAETPQGLIRGHAYSITKVCLMDISTPNRQGK--------LPMIRMRNPWGNDAEWSGPWS 511
            |.....:|..||:||||||:|.|         .|||        :.::|:|:|||    .:.|.:
Zfish   262 PTAQRTKTASGLVRGHAYSVTGV---------EQGKRKDGKDLMIRLVRVRDPWG----VAPPPA 313

  Fly   512 DSSPEWRFIPEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQHSSRRKWEM 576
            ..|.:|..:.:..:::..|.....|||||.|::|..:|.::|||||:||:|.:||..    ||.:
Zfish   314 CKSNDWVELAKTEQDKQRLQPGEQGEFWMCFEEFQKNFTKLEICNLTPDTLEDDQMF----KWNV 374

  Fly   577 SMFEGEWTSGVTAGGCRNFLETFWHNPQYIISLEDPDDEDDDGKCTAIVALMQKNRRSKRNVGID 641
            ::.||.|..|.:|||||||.:|:|.|||:.:.|.:.|.::.  .||.:||||||.||.:|..|..
Zfish   375 TVHEGRWVKGCSAGGCRNFPDTYWTNPQFRLVLLEADAKEK--TCTVVVALMQKGRRVERCSGAT 437

  Fly   642 CLTIGFAIYHLTDRDMQVKPQ---GLNFFKYRASVARSPHFINTREVCARFKLPPGHYLIVPSTF 703
            ...||||||.: .::|:...|   ..:||.|.||.|||..::|.|||..||.|.||.|:|:||||
Zfish   438 LHNIGFAIYEV-PKEMKGNQQQQLSKDFFLYNASTARSKSYVNIREVTERFCLKPGEYVIIPSTF 501

  Fly   704 DPNEEGEFIIRVFSETRNNMEENDDEVGFGETD----DRIAPSLPPPTPKEEDDPQRIALRRLFD 764
            ||::|.||::|||||.|:..:..|.|:   |.:    |.:...:.|  .:||:..:....|.:|.
Zfish   502 DPHKESEFLLRVFSENRSTSKVIDAEI---EAEPMQVDNVKKKIKP--FEEEETEEEKQFRAIFQ 561

  Fly   765 SVAGSDEEVDWQELKRILDHSM-RDVMVGSDGFSKDAVRSMVAMLDKDRSGRLGFEEFEALLTDI 828
            .:||.|.|::..||:.:|:..: :...:.::|||.::.|||:|:||.|.:|.|..:||:.|...|
Zfish   562 QIAGDDMEINANELRTVLNRVVAKHKELKTEGFSLESCRSMIALLDTDGTGHLNLQEFKHLWNKI 626

  Fly   829 AKWRAVFKLYDTRRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGSREGQIPFDDFLMCAIKV 893
            .:|:.||..:||.::.:|..|.:|.||..||:.|||:|.:.:..||.:...::.||.::.|.:::
Zfish   627 KQWKLVFTRFDTDKSSTISSFEMRNALTEAGFQLNNQLYDIICMRYANEHMELDFDSYISCLVRL 691

  Fly   894 RTFIEMFRERDTDNSDTAFFNLDDWLERTIYS 925
            ......||..|.|.......|:.:||:.|:|:
Zfish   692 EGMFRAFRAFDKDGDGLIKLNVFEWLQLTMYA 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_524016.4 PHA03247 <40..207 CDD:223021
Peptidase_C2 260..556 CDD:459889 155/304 (51%)
Calpain_III 579..716 CDD:460050 67/139 (48%)
EFh_PEF_CalpA_B 758..925 CDD:320071 54/167 (32%)
EF-hand motif 758..786 CDD:320071 9/27 (33%)
EF-hand motif 799..829 CDD:320071 12/29 (41%)
EF-hand motif 830..860 CDD:320071 11/29 (38%)
EF-hand motif 866..894 CDD:320071 6/27 (22%)
EF-hand motif 895..925 CDD:320071 8/29 (28%)
capn3bNP_001230250.1 Peptidase_C2 66..358 CDD:459889 155/304 (51%)
Calpain_III 377..514 CDD:460050 67/139 (48%)
EFh_PEF_CAPN3 555..723 CDD:320065 54/167 (32%)
EF-hand motif 555..583 CDD:320065 9/27 (33%)
EF-hand motif 598..627 CDD:320065 12/28 (43%)
EF-hand motif 628..658 CDD:320065 11/29 (38%)
EF-hand motif 663..692 CDD:320065 6/28 (21%)
EF-hand motif 693..723 CDD:320065 8/29 (28%)
Blue background indicates that the domain is not in the aligned region.

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