DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpB and capn5b

DIOPT Version :9

Sequence 1:NP_001246706.1 Gene:CalpB / 39165 FlyBaseID:FBgn0025866 Length:925 Species:Drosophila melanogaster
Sequence 2:XP_009293672.1 Gene:capn5b / 100006332 ZFINID:ZDB-GENE-091116-29 Length:659 Species:Danio rerio


Alignment Length:541 Identity:212/541 - (39%)
Similarity:305/541 - (56%) Gaps:75/541 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 FTSVKVPENQNMFWMGRKATSARQNSVSKGDFQSLRDSCLANGTMFEDPDFPATNASLMYSRRPD 279
            |:|.|..|.|:                    :.:|:..||.:|.:||||.|||.:.||.|.....
Zfish     2 FSSAKAFEGQH--------------------YSTLKRQCLQSGALFEDPLFPAVDDSLFYQGNRI 46

  Fly   280 RYYEWLRPGDIADDPQFFVEGYSRFDVQQGELGDCWLLAAAANLTQDSTLFFRVIPP------DQ 338
            ....|.||.::.|||..||:|.|..|:.||:||:||.:||.::|....:|:.:|||.      |.
Zfish    47 GRVHWKRPEELCDDPHLFVDGISAHDLHQGQLGNCWFVAACSSLASRESLWQKVIPDWKEQEWDP 111

  Fly   339 DFQENYAGIFHFKFWQYGKWVEVVIDDRLPTYNGELIYMHSTEKNEFWSALLEKAYAKLHGSYEA 403
            :..::|||||||:||::|:||:|||||||||.:.:|:|.||.:.|||||||:||||||::|.|||
Zfish   112 EKADSYAGIFHFRFWRFGEWVDVVIDDRLPTVDNQLVYCHSNDSNEFWSALVEKAYAKVYGCYEA 176

  Fly   404 LKGGTTCEAMEDFTGGVTEWYDIKE--------APPNLFSIMMKAAERGSMMGCSLEPDP-HVLE 459
            |.||.|.:|:.||||||:|..|:.|        |...||..::|...|..::.||:.... ..:|
Zfish   177 LDGGNTADALVDFTGGVSEPMDLLEGQFAQDETARNQLFERVLKVHNRDGLISCSIRATTVEDME 241

  Fly   460 AETPQGLIRGHAYSITKVCLMDIS----TPNRQGKLPMIRMRNPWGNDAEWSGPWSDSSPEWRFI 520
            |....||::||||::|.|..:.:.    ...:..||.||||||||| :.||||||||||.||:.:
Zfish   242 ARLDCGLVKGHAYAVTDVRKVRLGHGLLAYFKSEKLHMIRMRNPWG-EKEWSGPWSDSSEEWKKV 305

  Fly   521 PEHTKEEIGLNFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQHSSRRKWEMSMFEGEWTS 585
            .:..:|::|:....||||||:|:||.::|..:.:|.|...|..     |..:.||..:..|.|..
Zfish   306 SKSEREKLGVTVQDDGEFWMNFEDFCHYFTDLILCRLINTSYL-----SIHKTWEEEVMRGLWLH 365

  Fly   586 -----GVTAGGCRNFLETFWHNPQYIISLEDPDDEDDDGKCTAIVALMQKNRRS--KRNVGIDCL 643
                 ...||||.|...||..||||:..:...:||       .::.|.||.||:  |...| :.|
Zfish   366 RDEPLRNRAGGCINHKTTFLQNPQYVFDVRKVEDE-------VLICLQQKERRATPKEGKG-ENL 422

  Fly   644 TIGFAIYHLTDRDMQVKPQGLNFFKYRASVAR----SPHFINTREVCARFKLPPGHYLIVPSTFD 704
            .|||.|:.:.          || .|||...|:    ...:||:|.|..|.:|..|.|:|:|:|||
Zfish   423 AIGFDIHRVE----------LN-RKYRMHSAQQKVAGSIYINSRCVFLRKELKEGRYVIIPTTFD 476

  Fly   705 PNEEGEFIIRVFSETRNNMEE 725
            |.::|||::|||::..::.:|
Zfish   477 PGQQGEFLLRVFTDVPSDCKE 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpBNP_001246706.1 PD-C2-AF1 33..225 CDD:286403 4/9 (44%)
Drf_FH1 37..189 CDD:283903
Peptidase_C2 260..556 CDD:279042 143/314 (46%)
Calpain_III 574..721 CDD:279416 55/157 (35%)
EF-hand_7 759..825 CDD:290234
EFh 761..826 CDD:298682
FRQ1 827..>908 CDD:227455
capn5bXP_009293672.1 Peptidase_C2 27..341 CDD:279042 143/314 (46%)
Calpain_III 354..493 CDD:279416 55/157 (35%)
C2_Calpain 515..657 CDD:176011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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