DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Taf2 and taf2

DIOPT Version :9

Sequence 1:NP_001261668.1 Gene:Taf2 / 39164 FlyBaseID:FBgn0011836 Length:1221 Species:Drosophila melanogaster
Sequence 2:XP_012820635.1 Gene:taf2 / 100145691 XenbaseID:XB-GENE-968254 Length:1191 Species:Xenopus tropicalis


Alignment Length:1205 Identity:567/1205 - (47%)
Similarity:786/1205 - (65%) Gaps:90/1205 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RPFKLAHQVVSLTGISFERRSIIGVVELTIVPNSENLRLIRLNAKQLRIYSVVLNDVCQADFTYF 77
            |.:||.||||.:..::|:|:.:||.|||||.|...:|..|:||:||.|||.|.:||: :|.|.|.
 Frog    14 RHYKLTHQVVCINNVNFQRKCVIGYVELTICPMVTSLNRIKLNSKQCRIYRVRVNDL-EAAFIYN 77

  Fly    78 DPFQNICYKEHKSRALEVYSKHHLTAAQYTDPDVNNGELLIQVPPEGYSMIQEGQGLRIRIEFSL 142
            ||...||:.|.|.|.|..:|..:..|....|||..||||.|:||.|.:..:.|.:.|::.|||||
 Frog    78 DPTLEICHHESKQRNLNYFSNTYAAAVTAVDPDAGNGELCIKVPSELWKQVDELKSLKVYIEFSL 142

  Fly   143 ENPKCGVHFVIPPASTDEETQMNSSHMFTNCYENSSRLWFPCVDSFADPCTWRLEFTVDKNMTAV 207
            :.||.|:|||:|  :.:.......:|:|:..|:||||.|||||||:::.|||:||||||.:|.||
 Frog   143 DQPKGGLHFVVP--NVEGSMAERGAHLFSYGYQNSSRFWFPCVDSYSELCTWKLEFTVDASMVAV 205

  Fly   208 SCGELLEVIMTPDLRKKTFHYSVSTPVCAPNIALAVGQFEIYVDPHMHEVTHFCLPGLLPLLKNT 272
            |.|:|:||..|.|:|||||.|:::.|..||||:||||.||:.|||:||||||||||.||||||:|
 Frog   206 SNGDLVEVEYTHDMRKKTFRYTLTIPTAAPNISLAVGPFEVLVDPYMHEVTHFCLPQLLPLLKHT 270

  Fly   273 VRYLHEAFEFYEETLSTRYPFSCYKQVFVDELDTDISAYATMSIASVNLLHSIAIIDQTYISRTF 337
            ..||||.||||||.|:.|||:||:|.|||||...::::||:|||.|.|||||..|||||.::|.:
 Frog   271 TAYLHEVFEFYEEILTCRYPYSCFKTVFVDEAYIEVASYASMSIFSTNLLHSSMIIDQTPVTRRY 335

  Fly   338 MSRAVAEQFFGCFITSHHWSDTWLAKGIAEYLCGLYSRKCFGNNEYRAWVQSELARVVRYEEQYG 402
            ::.::|:|||||||:...|||.|:.|||:.|:.||:.:|.||.|:||.|::.||..:|.||.:.|
 Frog   336 LAHSLAQQFFGCFISRMSWSDEWVLKGISGYIYGLWMKKTFGVNQYRHWIKDELDTIVAYELKTG 400

  Fly   403 GIILDCSQPPAPLPVSGTNQSAASSKQQEIVHYFPIKSLHTVSPKYVEAMRRKAHFVIRMLENRI 467
            |::|.      |:..||..:...:|    .:| |.||..||:|.:|....:.|||.|:|::||||
 Frog   401 GVLLH------PIFSSGKEKDNPAS----YLH-FSIKHPHTLSWEYYNMFQCKAHLVMRLIENRI 454

  Fly   468 GQELLIQVFNKQLALASSAATTKIGAGLWSQLLISTNIFIKAIFTVTGKDMSVFMDQWVRTGGHA 532
            ..|.::|||||.|:|||:|::.|..:.:|||:|:||:.|:|:|..|:|||:...:.|||...|..
 Frog   455 SMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVV 519

  Fly   533 KFSLTSVFNRKRNTIELEIRQDYVNQRGIRKYNGPLMVQLQELDGTFKHTLQIESTLVKSDITCH 597
            ||..:..||||||.:||||:|||.: .|.:||.||:.|.:|||||:|.||||||...:|.||.||
 Frog   520 KFYGSFAFNRKRNVLELEIKQDYTS-LGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCH 583

  Fly   598 SKSRRNKKKKIPLCTGEEVDMDLSAMD-DSPVLWIRLDPEMILLRDLIIEQPDFQWQYQLRHERD 661
            |||||||||||||..|||||||||||| |||:||||:||:|.:||.:..||.||.||||||:|||
 Frog   584 SKSRRNKKKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERD 648

  Fly   662 VTAQFQAIQALQKYPTNATRLALTDTIESERCFYQVRCEAAHSLTKVANQMVASWSGPPAMLNIF 726
            |.||.:||.||:.:||.|:||||||.:|.|:|||:||..|...|.|:||.||::|:|||||.::|
 Frog   649 VVAQEEAILALETFPTPASRLALTDILEQEQCFYRVRMMACFCLAKIANSMVSTWTGPPAMKSLF 713

  Fly   727 RKFFGSFSAPHIIKLNNFSNFQLYFLQKAIPVAMAGLRTSHGICPPEVMRFLFDLFKYNENSRNH 791
            .:.|...|.|:|:|.|||.|||.|||||.:|||||.||..|.:||.||:.|:.||.|||:|.:|.
 Frog   714 TRMFCCKSCPNIVKTNNFLNFQSYFLQKTMPVAMALLRDVHNLCPKEVLSFILDLIKYNDNRKNK 778

  Fly   792 YTDAYYRAALVEALGETLTPVVSVAIHGTQITTDSLSTDAKLVLDEVTRLLNMEKHLPSYKYMVS 856
            ::|.||||.|::||..::||.|||  :....|.|:|:.|.:|:|:|:||.|||||.||||:::::
 Frog   779 FSDNYYRAELIDALSNSVTPAVSV--NNESRTLDNLNADVRLILEEITRFLNMEKLLPSYRHIIT 841

  Fly   857 VSCLKVIRKLQKFGHLPSLPHIYRSYAEYGIYLDLRIAAMECLVDFVKVDGRSEDLEHLITLLET 921
            ||||:.||.|||.||:||.|.:::||||.|.::|:|:||:|.:||:.|||...|||:.|:|:.:.
 Frog   842 VSCLRAIRILQKNGHVPSDPTLFKSYAENGHFVDVRVAALEAVVDYTKVDRSCEDLQWLLTMAQN 906

  Fly   922 DPDPAARHALAQLLIDNPPFTRESRSRLDKPNLVDRLWFSINR-LPYDTKLRCDIVDLYYALYGT 985
            ||.|..||.:..:|..|||||:...|.|....|||:||..:|. ..:|.:|||..||||:.|:|.
 Frog   907 DPVPYIRHKIFYMLSKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRLRCGAVDLYHILFGL 971

  Fly   986 KRPNCLQAGENQSFYKDLMKDNNSSVGSVTG-SFKKTSDSKSHLPTP-----------------T 1032
            .||:||...|               :|.|.. ..||...:.:.:|.|                 |
 Frog   972 SRPSCLPLPE---------------LGLVLNLKEKKAVLNPTIIPEPAASNPDPVPSAGMHGQVT 1021

  Fly  1033 NTLDNEPQERQKPAMVT---IKRTATEAF----EVGDEIIKLERSEEITVL---DEPVNVQ-AYD 1086
            ...:||...::..|.|.   :||.|..:|    |.|..:.|.|.|.::.:.   :|.:::. .:|
 Frog  1022 AFPNNEEDSKEAVASVLSLGVKRKAEASFDSSVEPGQVLEKNEDSNKVKLKMREEEEIDMDTVHD 1086

  Fly  1087 SET----KVNALQ------ADEEARDTHQAAKRLKNEMYAEDDNSSTMLDVGDSTRYESSHEEGK 1141
            |:.    .:|.|:      .::...|:|.....:....:.::.:||.     .|..:...|.:  
 Frog  1087 SQAFIYHHLNMLERPSTPGKEQSGLDSHLPLPSVPLSAFMKESSSSK-----HSDHHHHHHHD-- 1144

  Fly  1142 LKSGDGGLKKKKKKEKKKHKHKHKHRH-SKDKDKD 1175
                     .||||:|.||||||||:| ||:|:::
 Frog  1145 ---------HKKKKKKHKHKHKHKHKHESKEKERE 1170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf2NP_001261668.1 M1_TAF2 16..544 CDD:189018 263/527 (50%)
taf2XP_012820635.1 M1_like_TAF2 18..513 CDD:341074 254/508 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 547 1.000 Domainoid score I256
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H31137
Inparanoid 1 1.050 1025 1.000 Inparanoid score I281
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D134492at33208
OrthoFinder 1 1.000 - - FOG0004794
OrthoInspector 1 1.000 - - oto104604
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4475
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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