DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8108 and REB1

DIOPT Version :9

Sequence 1:NP_648367.1 Gene:CG8108 / 39161 FlyBaseID:FBgn0027567 Length:919 Species:Drosophila melanogaster
Sequence 2:NP_009605.1 Gene:REB1 / 852338 SGDID:S000000253 Length:810 Species:Saccharomyces cerevisiae


Alignment Length:706 Identity:127/706 - (17%)
Similarity:237/706 - (33%) Gaps:227/706 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 NSSDDSSGKEDKDGEDAEKSKKKKGKDKDADGGDESDDDDDD------------EEDDDEKDEKS 322
            |::|||:..|| :.:|:|........:..::....:.::..:            .:.|||.||.:
Yeast    61 NNNDDSNRNED-NNDDSENISALNANESSSNVDHANSNEQHNAVMDWYLRQTAHNQQDDEDDENN 124

  Fly   323 KKTSPGKKRNKSANNEDKSEAEGNDDDDDDDDEHGDGDDDDDKDL-------------------- 367
            ..|..|   |.|.|:..:|:...:||||.:..:.|.|.|||.:.:                    
Yeast   125 NNTDNG---NDSNNHFSQSDIVVDDDDDKNKKDAGVGVDDDHQSMAMAAVAAAYTLSKNNNNNNS 186

  Fly   368 --NESDPKSAKADDASDDED--VKVKGDGEDGD-------------GDKSDEKAKSSV------- 408
              |:|:.:..:.|:.::.|:  .|.|.:.:|.|             ||..|....:.|       
Yeast   187 IANDSNSRKRQHDNGNNHENSQKKRKNNNDDDDRQIGNVDPELTTLGDADDNDTNNDVIDRDQLV 251

  Fly   409 -----------------EKSGKKKDKDDAKDSKSKKSSSTKKERTSRKDKDKESSGDDRSKERRS 456
                             :......|.||.:..|..|....:....:.::|:.....||.|...:.
Yeast   252 HKAIIDADSITQHPDFQQYLNTAADTDDNEKLKHIKDHLMRTHGLNHQNKNHNDDTDDLSNSTKQ 316

  Fly   457 SRHRDEDHN-----NRKRSFIKLICVHCRIKCVTFKEYNYHLNSRSHKN-----------SMRQV 505
            .....:|..     |:.|::::::     .|.::.....:...|.||.|           .:.|.
Yeast   317 YSELQKDSMLDSSLNKSRNYMEVL-----PKVISQDTQPHQQKSPSHDNEAGSVDNSEISQLLQS 376

  Fly   506 ALNQRADLQRMRARQRTTQREIEENSK----------EEHESRYCRLCRLAYRQPKNLHQASEHH 560
            |..:.:.|..:.:...|.......|||          |...:.|..:.||..:|......:|:..
Yeast   377 AATKASSLVSLSSSSATPSTSRSNNSKAFDKAEDAALERFINEYEAIERLTRQQVCERIWSSDRP 441

  Fly   561 K-----TIKKFLMPYCGSCHLAFKNAMLYENHRCSLDHIRNKARNDESGSDDSVDEREIDLNKFH 620
            |     .|.| ::||..|       :.:|:       |:|                     .|:|
Yeast   442 KDNFWNNIYK-VLPYRSS-------SSIYK-------HMR---------------------RKYH 470

  Fly   621 TVDSVG------EIDVDMIDADVDAMVTEAEAALKSEDEETRKRALIGPDYIKVIEAFYC---EL 676
            ..:..|      |.::..:.|:.:....|....|....|:.|.|   ..:|:|      |   ..
Yeast   471 IFEQRGKWTAEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDR---WRNYVK------CGTNRA 526

  Fly   677 CNHYSAKADDV---SLEDYTKKHCMQHSHVKAFLRNKEE---TEKKNKTEEGDEDDHD------- 728
            .|.:|.:.:::   .:.|..::...|.|.:...|..:|:   .:.:|.....||||.|       
Yeast   527 SNRWSVEEEELLKKVISDMLEEAQQQQSQLHPNLLEEEQHLLQDDQNDHRNNDEDDDDTASAAAA 591

  Fly   729 ------------DDKKAGDDDAD-----------GDEDIDGKLNEDDDEYDDDGDAEVEEGD--- 767
                        ..|:..||||.           ||       |:|:|:..|....::::..   
Yeast   592 AAAAIQEQQQLLQQKQQDDDDAIAAAAAAASSSLGD-------NKDEDKPHDSLGIQLDDNSQNS 649

  Fly   768 --------ATNDKKMWEEVDKDLGDLLAEVETRGHKEDEEDEEDESVLNIDIESEK 815
                    :|:.|.:...:.:....|...:...| |.|.:|     ::|..|.||:
Yeast   650 MVPAPSATSTHSKSLSNTIRRHNNKLRKSLMGNG-KLDFKD-----IINWTIVSER 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8108NP_648367.1 None
REB1NP_009605.1 REB1 202..701 CDD:227476 96/561 (17%)
SANT <691..719 CDD:197842 4/9 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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