DRSC/TRiP Functional Genomics Resources

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Protein Alignment iPLA2-VIA and PLP1

DIOPT Version :10

Sequence 1:NP_729565.2 Gene:iPLA2-VIA / 39160 FlyBaseID:FBgn0036053 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_849511.1 Gene:PLP1 / 829861 AraportID:AT4G37070 Length:414 Species:Arabidopsis thaliana


Alignment Length:272 Identity:70/272 - (25%)
Similarity:110/272 - (40%) Gaps:67/272 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   555 DKPYGRGRL---LCLDGGGIRGLVLVQMLLEIEKL------SRTPIIHMFDWIAGTSTGGILALA 610
            :||...|.|   |.|||||:||::...:|..:||.      ....:...||.||||||||::...
plant    10 NKPPSCGSLVTILSLDGGGVRGIIAGVILAFLEKQLQELDGEEARLADYFDVIAGTSTGGLVTAM 74

  Fly   611 L----------------------GCGKTMRQCMG-LYLRMKEQCFVGSRPYNSEFFESILKDNLG 652
            |                      .|.|...|..| |.|..|....:....|:.::..::|...||
plant    75 LTVPDETGRPHFAAKDIVPFYLEHCPKIFPQPTGVLALLPKLPKLLSGPKYSGKYLRNLLSKLLG 139

  Fly   653 E---FNVMTDIKHPKIMVTGVMADRKPVDLHLFRNYTSASDILGIVTPINNRRIPPPQPSEQLVW 714
            |   ...:|:|..|..       |.|.:...:|.:|..      :|.|..:.::     |:..:.
plant   140 ETRLHQTLTNIVIPTF-------DIKKLQPTIFSSYQL------LVDPSLDVKV-----SDICIG 186

  Fly   715 RAARATGAAPSYF--------RAFGRFLDGGLIANNPTLDAMTEIHEYNMALRSAGRESEAIPVS 771
            .:|..|...|.||        :.....:||.:.||||||.|||.:.:  ..:::.....:..|:.
plant   187 TSAAPTFFPPHYFSNEDSQGNKTEFNLVDGAVTANNPTLVAMTAVSK--QIVKNNPDMGKLKPLG 249

  Fly   772 ----VVMSLGTG 779
                :|:|:|||
plant   250 FDRFLVISIGTG 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iPLA2-VIANP_729565.2 ANKYR 143..418 CDD:440430
ANK repeat 166..226 CDD:293786
ANK repeat 228..261 CDD:293786
ANK repeat 292..320 CDD:293786
ANK repeat 322..353 CDD:293786
ANK repeat 355..386 CDD:293786
ANK repeat 388..417 CDD:293786
Pat_PNPLA9 563..876 CDD:132851 67/264 (25%)
PLP1NP_849511.1 Pat17_isozyme_like 16..366 CDD:132853 68/266 (26%)
Blue background indicates that the domain is not in the aligned region.

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