DRSC/TRiP Functional Genomics Resources

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Protein Alignment iPLA2-VIA and Pla2g6

DIOPT Version :9

Sequence 1:NP_729565.2 Gene:iPLA2-VIA / 39160 FlyBaseID:FBgn0036053 Length:887 Species:Drosophila melanogaster
Sequence 2:XP_006242059.1 Gene:Pla2g6 / 360426 RGDID:628867 Length:868 Species:Rattus norvegicus


Alignment Length:867 Identity:304/867 - (35%)
Similarity:459/867 - (52%) Gaps:101/867 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RDDAMLLFAPPFNSSNEKRAVYEIILQRPTSDSNTTSFSLYRSPVQQEAEERFNAFLQRLPVFVS 108
            |::..|:...  |:||.   .::.:|..|.:..  :.|.|::...:.:|...|..:..:||.|..
  Rat    76 REEGQLILLQ--NASNR---TWDCVLVSPRNPQ--SGFRLFQLESEADALVNFQQYSSQLPPFYE 133

  Fly   109 IVKEYYNVNGLQKACDALADNPSWTLSHLIAYFNLVDYISNPKMLQCVDQADAATLMSPFQLAIK 173
            ...:..:|..||...|.:.::||||::||.....:.:...:.:::.|.:..:.....:|..||.:
  Rat   134 SSVQVLHVEVLQHLTDLIRNHPSWTVTHLAVELGIRECFHHSRIISCANSTENEEGCTPLHLACR 198

  Fly   174 QGHMEMVKALLPLSKLEHLDINSN---SVFHYAA-STTKEIINLIIDKSTVNLNHLNSDGYTPLH 234
            :|..|::..|:.....: :|:..|   :.||||. ....:::.|:...::..||.:|:.|.||||
  Rat   199 KGDSEILVELVQYCHAQ-MDVTDNKGETAFHYAVQGDNPQVLQLLGKNASAGLNQVNNQGLTPLH 262

  Fly   235 VACLADKPENVKALLLAGANVNL---NAKDIRKVYKTSAPTTVSSFLRTNVSKLYTQDMKYGGTP 296
            :||...|.|.|:.|||..|..|:   ....|....|.|........:..:.::::::|.:||.:|
  Rat   263 LACQMGKQEMVRVLLLCNARCNIMGPGGFPIHTAMKFSQKGCAEMIISMDSNQIHSKDPRYGASP 327

  Fly   297 LHWCSSRETLHALIMEGCDVNATNFDGRTALHVMVARNRFECVVTLLAHDAEIDVLDKDGNAALH 361
            |||..:.|....|:..||||::|:..|.|||||.|.||||:||:.||.:.|......:.||..||
  Rat   328 LHWAKNAEMARMLLKRGCDVDSTSASGNTALHVAVTRNRFDCVMVLLTYGANAGARGEHGNTPLH 392

  Fly   362 IAIEKKLVPIVQCLVVFGCDINLKNKDGKTPRHMVGNDASGNKDDEILYILHSVGAKRCKDTGSK 426
            :|:.|..:.:|:.|:|||.:::..|..|:||..:....:.......:|.:|.:|||         
  Rat   393 LAMSKDNMEMVKALIVFGAEVDTPNDFGETPAFIASKISKLITRKALLTLLKTVGA--------- 448

  Fly   427 CPPGCNAKGNYN-----GIPPEAPESVEQREHIEHMLATTSRQMMGGFLNAAANGILEKQQP--- 483
                     :|:     |:..|  :|.....|....|..|....:.  ||   |..|:...|   
  Rat   449 ---------DYHFPFIQGVSTE--QSSAAGPHPFFSLDRTQPPTIS--LN---NLELQDLMPVSR 497

  Fly   484 AQKPVVV-----DTEKEL---KGQSIMDALLGMFTTKVNADEMKKENSSDSLASGSQKSAVSSPE 540
            |:||..:     |.::.|   .|..:::|.||                                 
  Rat   498 ARKPAFILSSMRDEKRRLLSTLGSLLLEAFLG--------------------------------- 529

  Fly   541 QLPSPTSPIAAEIGDKPYGRGRLLCLDGGGIRGLVLVQMLLEIEKLSRTPIIHMFDWIAGTSTGG 605
                .|:...:|..|      .||||||||::|||::|:|:.|||.|......:|||:|||||||
  Rat   530 ----GTTDFQSESHD------HLLCLDGGGVKGLVIIQLLIAIEKASGVATKDLFDWVAGTSTGG 584

  Fly   606 ILALALGCGKTMRQCMGLYLRMKEQCFVGSRPYNSEFFESILKDNLGEFNVMTDIKHPKIMVTGV 670
            |||||:...|:|....|:|.|||::.|.|||||.|...|..||...||...|||:|.||:|:||.
  Rat   585 ILALAILHSKSMAYMRGVYFRMKDEVFRGSRPYESGPLEEFLKREFGEHTKMTDVKKPKVMLTGT 649

  Fly   671 MADRKPVDLHLFRNYTSASDIL-GIVTPINNRRIPPPQPSEQLVWRAARATGAAPSYFRAFGRFL 734
            ::||:|.:|||||||.:...:. ...||..|.: ||.||::||||||||::||||:|||..||||
  Rat   650 LSDRQPAELHLFRNYDAPEAVREPRCTPNINLK-PPTQPADQLVWRAARSSGAAPTYFRPNGRFL 713

  Fly   735 DGGLIANNPTLDAMTEIHEYNMALRSAGRESEAIPVSVVMSLGTGHIPVTELKDIDVFRPESIWD 799
            ||||:||||||||||||||||..:...|:.::...:|:|:|||||..|...:..:|||||.:.|:
  Rat   714 DGGLLANNPTLDAMTEIHEYNQDMIRKGQGNKVKKLSIVVSLGTGKSPQVPVTCVDVFRPSNPWE 778

  Fly   800 TAKLAYGISTIGNLLVDQATCSDGRVVDRARAWCSTIGIPYFRFNPQLSEDIAMDEKDDQKLINM 864
            .||..:|...:|.::||..|..|||.||||||||..:||.|||.||||..||.:||..|..|:|.
  Rat   779 LAKTVFGAKELGKMVVDCCTDPDGRAVDRARAWCEMVGIQYFRLNPQLGSDIMLDEVSDAVLVNA 843

  Fly   865 LWHTKAYMHANRNKIIEMINFL 886
            ||.|:.|::.:|.:..:::..|
  Rat   844 LWETEVYIYEHREEFQKLVQLL 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iPLA2-VIANP_729565.2 ANK repeat 166..226 CDD:293786 15/63 (24%)
Ank_2 168..258 CDD:289560 30/96 (31%)
ANK 191..343 CDD:238125 55/158 (35%)
ANK repeat 228..261 CDD:293786 15/35 (43%)
ANK 291..412 CDD:238125 45/120 (38%)
ANK repeat 292..320 CDD:293786 12/27 (44%)
Ank_2 297..386 CDD:289560 37/88 (42%)
ANK repeat 322..353 CDD:293786 16/30 (53%)
ANK repeat 355..386 CDD:293786 11/30 (37%)
ANK repeat 388..417 CDD:293786 6/28 (21%)
Pat_PNPLA9 563..876 CDD:132851 169/313 (54%)
Pla2g6XP_006242059.1 Ank_2 140..220 CDD:289560 18/80 (23%)
ANK repeat 156..186 CDD:293786 6/29 (21%)
ANK 186..309 CDD:238125 34/123 (28%)
ANK repeat 188..220 CDD:293786 7/32 (22%)
Ank_2 193..285 CDD:289560 29/92 (32%)
ANK repeat 222..254 CDD:293786 7/31 (23%)
ANK 251..407 CDD:238125 57/155 (37%)
ANK repeat 256..285 CDD:293786 14/28 (50%)
ANK repeat 323..351 CDD:293786 12/27 (44%)
Ank_2 328..417 CDD:289560 37/88 (42%)
ANK repeat 353..384 CDD:293786 16/30 (53%)
ANKYR <382..>456 CDD:223738 21/91 (23%)
ANK repeat 386..417 CDD:293786 11/30 (37%)
Pat_PNPLA9 542..855 CDD:132851 169/313 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350280
Domainoid 1 1.000 217 1.000 Domainoid score I2610
eggNOG 1 0.900 - - E1_COG3621
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2635
Inparanoid 1 1.050 376 1.000 Inparanoid score I2017
OMA 1 1.010 - - QHG49455
OrthoDB 1 1.010 - - D362279at33208
OrthoFinder 1 1.000 - - FOG0005157
OrthoInspector 1 1.000 - - oto98709
orthoMCL 1 0.900 - - OOG6_104994
Panther 1 1.100 - - LDO PTHR24139
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5526
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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