DRSC/TRiP Functional Genomics Resources

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Protein Alignment iPLA2-VIA and nfkbiab

DIOPT Version :10

Sequence 1:NP_729565.2 Gene:iPLA2-VIA / 39160 FlyBaseID:FBgn0036053 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_955923.1 Gene:nfkbiab / 323099 ZFINID:ZDB-GENE-030131-1819 Length:312 Species:Danio rerio


Alignment Length:239 Identity:54/239 - (22%)
Similarity:102/239 - (42%) Gaps:45/239 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 SVFHYAASTTKEIINLIIDKSTVNLNHLNSDGYTPLHVACLADKPENVKALLLAGANVNLNAKDI 262
            ::.|.|.....::|.|  .:....||..|:...|.||:|.:.|:|..|:.||.||.:.:|     
Zfish    80 AIIHEATDAALKMIAL--SRRDPFLNIQNNQRQTALHLAIITDQPLIVEQLLKAGCDASL----- 137

  Fly   263 RKVYKTSAPTTVSSFLRTNVSKLYTQDMKYGGTPLHWCSSRETL--HALIMEGCD------VNAT 319
                                    ..|  :|.|.||....:.:|  ..|:.:||.      :...
Zfish   138 ------------------------VDD--HGNTALHIACRKGSLACFGLLTQGCSQHLSAILQTP 176

  Fly   320 NFDGRTALHVMVARNRFECVVTLLAHDAEIDVLDK-DGNAALHIAIEKKLVPIVQCLVVFGCDIN 383
            |::|:..:||:..:.....:.:|:...|:|:..:: :|..|||:|::.:...:|:.|:..|..::
Zfish   177 NYNGQKCIHVVAIQGYLSLLESLIQLGADINAQEQCNGRTALHLAVDLQNFDMVKLLIEKGASVH 241

  Fly   384 LKNKDGKTPRHMVGNDASGNKD-DEILYILHSVGAKRCKDTGSK 426
            .....|.||.|:  .....|.| .::||.|.|...:...::.|:
Zfish   242 SVTYGGHTPYHL--TYGRSNADIQKVLYELTSPHLRELPESDSE 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iPLA2-VIANP_729565.2 ANKYR 143..418 CDD:440430 53/229 (23%)
ANK repeat 166..226 CDD:293786 6/27 (22%)
ANK repeat 228..261 CDD:293786 12/32 (38%)
ANK repeat 292..320 CDD:293786 8/35 (23%)
ANK repeat 322..353 CDD:293786 6/30 (20%)
ANK repeat 355..386 CDD:293786 8/30 (27%)
ANK repeat 388..417 CDD:293786 10/29 (34%)
Pat_PNPLA9 563..876 CDD:132851
nfkbiabNP_955923.1 ANKYR 72..266 CDD:440430 49/220 (22%)
ANK repeat 72..106 CDD:293786 6/27 (22%)
ANK repeat 110..139 CDD:293786 12/57 (21%)
ANK repeat 141..210 CDD:293786 15/68 (22%)
ANK repeat 213..241 CDD:293786 8/27 (30%)
Blue background indicates that the domain is not in the aligned region.

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