DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10809 and Ankrd52

DIOPT Version :9

Sequence 1:NP_001163403.1 Gene:CG10809 / 39159 FlyBaseID:FBgn0036052 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001178804.1 Gene:Ankrd52 / 362811 RGDID:1307124 Length:1076 Species:Rattus norvegicus


Alignment Length:173 Identity:55/173 - (31%)
Similarity:83/173 - (47%) Gaps:28/173 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 NIELLNRILEGGANPNAADEYNRSPLHLAACRGYIPIVQQLLKYGANPNVVDSLGNTPLHLAVIS 239
            ::|.:..:|....|.|..|:..|:|||.||..|.:||:|.||..|||.|..|:|..||||.|   
  Rat    20 DVEEVRSLLSQKENINVLDQERRTPLHAAAYVGDVPILQLLLMSGANVNAKDTLWLTPLHRA--- 81

  Fly   240 ASSNNFNVVVGVLLQGGASVHMYDRSNKSPLELAEAKLRLLRNRYDHPTPETAKILEDMCMLTTL 304
            |:|.| ..|:|:||...|.|:..|:..::||.:|.|      ||       ..|..|.:..|.:.
  Rat    82 AASRN-EKVLGLLLAHSADVNARDKLWQTPLHVAAA------NR-------ATKCAEALAPLLSS 132

  Fly   305 I----------LRYMVKQQRELEDLSALEKRLQNLSTSDDQEQ 337
            :          |.:.| ....||.::.|..:..:|:..|.:|:
  Rat   133 LNVADRSGRSALHHAV-HSGHLETVNLLLNKGASLNVCDKKER 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10809NP_001163403.1 Ank_2 167..263 CDD:289560 37/87 (43%)
ANK repeat 167..193 CDD:293786 4/17 (24%)
ANK 170..276 CDD:238125 41/100 (41%)
ANK repeat 195..226 CDD:293786 16/30 (53%)
ANK repeat 228..263 CDD:293786 15/34 (44%)
Ankrd52NP_001178804.1 Ank_4 11..61 CDD:290365 15/40 (38%)
ANK repeat 11..38 CDD:293786 4/17 (24%)
ANK 35..193 CDD:238125 52/158 (33%)
ANK repeat 40..71 CDD:293786 16/30 (53%)
Ank_2 45..170 CDD:289560 46/142 (32%)
ANK repeat 76..104 CDD:293786 14/31 (45%)
ANK repeat 108..137 CDD:293786 9/41 (22%)
Ank_2 111..203 CDD:289560 16/78 (21%)
ANK 134..259 CDD:238125 8/42 (19%)
ANK repeat 139..170 CDD:293786 6/31 (19%)
ANK repeat 172..203 CDD:293786 1/3 (33%)
Ank_2 177..269 CDD:289560
ANK repeat 205..236 CDD:293786
ANK repeat 238..266 CDD:293786
Ank_2 243..336 CDD:289560
ANK 266..392 CDD:238125
ANK repeat 272..303 CDD:293786
ANK repeat 305..336 CDD:293786
ANK 333..476 CDD:238125
ANK repeat 338..363 CDD:293786
Ank_4 339..392 CDD:290365
ANK repeat 375..420 CDD:293786
Ank_2 376..486 CDD:289560
ANK 417..570 CDD:238125
ANK repeat 423..453 CDD:293786
ANK repeat 455..486 CDD:293786
Ank_2 460..575 CDD:289560
ANK repeat 488..547 CDD:293786
ANK 587..708 CDD:238125
ANK repeat 587..615 CDD:293786
Ank_2 589..682 CDD:289560
ANK repeat 618..648 CDD:293786
ANK repeat 653..685 CDD:293786
Ank_2 656..751 CDD:289560
ANK 682..811 CDD:238125
ANK repeat 687..718 CDD:293786
ANK repeat 720..751 CDD:293786
ANK repeat 753..784 CDD:293786
Ank_2 758..855 CDD:289560
ANK repeat 822..855 CDD:293786
ANK 852..981 CDD:238125
ANK repeat 857..888 CDD:293786
Ank_2 862..955 CDD:289560
ANK repeat 890..922 CDD:293786
ANK repeat 924..991 CDD:293786
ANK repeat 928..958 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.